Protein–RNA interactions for Protein: P38881

NVJ1, Nucleus-vacuole junction protein 1, yeastyeast

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NVJ1P38881 GIS3YLR094C 1509 nt11.22□□□□□ -0.61
NVJ1P38881 FPS1YLL043W 2010 nt11.21□□□□□ -0.61
NVJ1P38881 YFL021C-AYFL021C-A 855 nt11.21□□□□□ -0.61
NVJ1P38881 GFD2YCL036W 1701 nt11.19□□□□□ -0.62
NVJ1P38881 ART5YGR068C 1761 nt11.18□□□□□ -0.62
NVJ1P38881 YGR021WYGR021W 873 nt11.18□□□□□ -0.62
NVJ1P38881 GUT2YIL155C 1950 nt11.17□□□□□ -0.62
NVJ1P38881 RTS2YOR077W 699 nt11.11□□□□□ -0.63
NVJ1P38881 HOM6YJR139C 1080 nt11.1□□□□□ -0.63
NVJ1P38881 PET9YBL030C 957 nt11.1□□□□□ -0.63
NVJ1P38881 YSC84YHR016C 1407 nt11.09□□□□□ -0.63
NVJ1P38881 SHU1YHL006C 453 nt11.06□□□□□ -0.64
NVJ1P38881 YCH1YGR203W 447 nt11.04□□□□□ -0.64
NVJ1P38881 YAL037C-BYAL037C-B 975 nt11.03□□□□□ -0.64
NVJ1P38881 CUE1YMR264W 612 nt11.02□□□□□ -0.65
NVJ1P38881 YHL050CYHL050C 2094 nt11.01□□□□□ -0.65
NVJ1P38881 TIR4YOR009W 1464 nt10.99□□□□□ -0.65
NVJ1P38881 PIB2YGL023C 1908 nt10.98□□□□□ -0.65
NVJ1P38881 MNP1YGL068W 585 nt10.97□□□□□ -0.65
NVJ1P38881 RRT12YCR045C 1476 nt10.94□□□□□ -0.66
NVJ1P38881 RKM5YLR137W 1104 nt10.93□□□□□ -0.66
NVJ1P38881 YNL195CYNL195C 786 nt10.93□□□□□ -0.66
NVJ1P38881 RTF1YGL244W 1677 nt10.92□□□□□ -0.66
NVJ1P38881 YMR057CYMR057C 372 nt10.92□□□□□ -0.66
NVJ1P38881 YIL100WYIL100W 354 nt10.9□□□□□ -0.66
NVJ1P38881 BOP3YNL042W 1191 nt10.86□□□□□ -0.67
NVJ1P38881 YLR236CYLR236C 324 nt10.82□□□□□ -0.68
NVJ1P38881 NPL3YDR432W 1245 nt10.79□□□□□ -0.68
NVJ1P38881 YJL152WYJL152W 360 nt10.75□□□□□ -0.69
NVJ1P38881 PTK1YKL198C 1989 nt10.75□□□□□ -0.69
NVJ1P38881 YLR154C-GYLR154C-G 150 nt10.73□□□□□ -0.69
NVJ1P38881 YKL097CYKL097C 411 nt10.72□□□□□ -0.69
NVJ1P38881 YCL048W-AYCL048W-A 240 nt10.71□□□□□ -0.69
NVJ1P38881 NCP1YHR042W 2076 nt10.68□□□□□ -0.7
NVJ1P38881 YOL037CYOL037C 354 nt10.63□□□□□ -0.71
NVJ1P38881 YJL225CYJL225C 5277 nt10.59□□□□□ -0.71
NVJ1P38881 YFL054CYFL054C 1941 nt10.55□□□□□ -0.72
NVJ1P38881 UME6YDR207C 2511 nt10.54□□□□□ -0.72
NVJ1P38881 LCB1YMR296C 1677 nt10.53□□□□□ -0.72
NVJ1P38881 SPT8YLR055C 1809 nt10.48□□□□□ -0.73
NVJ1P38881 RRD1YIL153W 1182 nt10.44□□□□□ -0.74
NVJ1P38881 WHI5YOR083W 888 nt10.43□□□□□ -0.74
NVJ1P38881 FMP52YER004W 696 nt10.42□□□□□ -0.74
NVJ1P38881 IDH1YNL037C 1083 nt10.41□□□□□ -0.74
NVJ1P38881 YLR281CYLR281C 468 nt10.39□□□□□ -0.75
NVJ1P38881 GBP2YCL011C 1284 nt10.39□□□□□ -0.75
NVJ1P38881 SIM1YIL123W 1431 nt10.38□□□□□ -0.75
NVJ1P38881 PCM1YEL058W 1674 nt10.37□□□□□ -0.75
NVJ1P38881 YOR139CYOR139C 393 nt10.36□□□□□ -0.75
NVJ1P38881 BOR1YNL275W 1731 nt10.36□□□□□ -0.75
NVJ1P38881 DED1YOR204W 1815 nt10.35□□□□□ -0.75
NVJ1P38881 TCD2YKL027W 1344 nt10.34□□□□□ -0.75
NVJ1P38881 LYS4YDR234W 2082 nt10.32□□□□□ -0.76
NVJ1P38881 FMT1YBL013W 1206 nt10.29□□□□□ -0.76
NVJ1P38881 SWE1YJL187C 2460 nt10.29□□□□□ -0.76
NVJ1P38881 BIO4YNR057C 714 nt10.27□□□□□ -0.77
NVJ1P38881 SNF6YHL025W 999 nt10.26□□□□□ -0.77
NVJ1P38881 CWP1YKL096W 720 nt10.25□□□□□ -0.77
NVJ1P38881 ADH2YMR303C 1047 nt10.25□□□□□ -0.77
NVJ1P38881 IMP2'YIL154C 1041 nt10.24□□□□□ -0.77
NVJ1P38881 DSK2YMR276W 1122 nt10.17□□□□□ -0.78
NVJ1P38881 SOR2YDL246C 1074 nt10.16□□□□□ -0.78
NVJ1P38881 YDR433WYDR433W 441 nt10.16□□□□□ -0.78
NVJ1P38881 SOR1YJR159W 1074 nt10.16□□□□□ -0.78
NVJ1P38881 ERF2YLR246W 1080 nt10.16□□□□□ -0.78
NVJ1P38881 HSP60YLR259C 1719 nt10.16□□□□□ -0.78
NVJ1P38881 PUS2YGL063W 1113 nt10.14□□□□□ -0.79
NVJ1P38881 CRR1YLR213C 1269 nt10.13□□□□□ -0.79
NVJ1P38881 MXR2YCL033C 507 nt10.13□□□□□ -0.79
NVJ1P38881 YCL042WYCL042W 360 nt10.13□□□□□ -0.79
NVJ1P38881 RDN37-1RDN37-1 5354 nt10.12□□□□□ -0.79
NVJ1P38881 RDN37-2RDN37-2 5354 nt10.12□□□□□ -0.79
NVJ1P38881 YIH1YCR059C 777 nt10.11□□□□□ -0.79
NVJ1P38881 FMP45YDL222C 930 nt10.11□□□□□ -0.79
NVJ1P38881 YHR056W-AYHR056W-A 435 nt10.08□□□□□ -0.8
NVJ1P38881 YLL053CYLL053C 459 nt10.06□□□□□ -0.8
NVJ1P38881 RNQ1YCL028W 1218 nt10.06□□□□□ -0.8
NVJ1P38881 GLK1YCL040W 1503 nt10.06□□□□□ -0.8
NVJ1P38881 HEM12YDR047W 1089 nt10.04□□□□□ -0.8
NVJ1P38881 YPR011CYPR011C 981 nt10.04□□□□□ -0.8
NVJ1P38881 ERV46YAL042W 1248 nt10.03□□□□□ -0.8
NVJ1P38881 FRD1YEL047C 1413 nt10.01□□□□□ -0.81
NVJ1P38881 ATF2YGR177C 1608 nt10.01□□□□□ -0.81
NVJ1P38881 YKR040CYKR040C 504 nt10.01□□□□□ -0.81
NVJ1P38881 MIC10YCL057C-A 294 nt10.01□□□□□ -0.81
NVJ1P38881 FUR4YBR021W 1902 nt10.01□□□□□ -0.81
NVJ1P38881 MCH5YOR306C 1566 nt10.01□□□□□ -0.81
NVJ1P38881 tM(CAU)CtM(CAU)C 72 nt10□□□□□ -0.81
NVJ1P38881 IMT4tM(CAU)E 72 nt10□□□□□ -0.81
NVJ1P38881 IMT3tM(CAU)J3 72 nt10□□□□□ -0.81
NVJ1P38881 IMT1tM(CAU)O1 72 nt10□□□□□ -0.81
NVJ1P38881 IMT2tM(CAU)P 72 nt10□□□□□ -0.81
NVJ1P38881 YFL067WYFL067W 528 nt9.99□□□□□ -0.81
NVJ1P38881 RAX1YOR301W 1308 nt9.99□□□□□ -0.81
NVJ1P38881 SNG1YGR197C 1644 nt9.98□□□□□ -0.81
NVJ1P38881 LPX1YOR084W 1164 nt9.98□□□□□ -0.81
NVJ1P38881 CCA1YER168C 1641 nt9.97□□□□□ -0.81
NVJ1P38881 FTR1YER145C 1215 nt9.97□□□□□ -0.81
NVJ1P38881 ALG12YNR030W 1656 nt9.96□□□□□ -0.82
NVJ1P38881 TRM5YHR070W 1500 nt9.92□□□□□ -0.82
Retrieved 100 of 7,029 protein–RNA pairs in 31.7 ms