Protein–RNA interactions for Protein: P38235

YBR053C, Uncharacterized protein YBR053C, yeast

Predictions only

Length 358 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
YBR053C	P38235	SIS1	YNL007C	1059 nt		12.78	□□□□□ -0.36
YBR053C	P38235	MEP2	YNL142W	1500 nt		12.78	□□□□□ -0.36
YBR053C	P38235	RPP2A	YOL039W	321 nt		12.7	□□□□□ -0.38
YBR053C	P38235	YJL152W	YJL152W	360 nt		12.69	□□□□□ -0.38
YBR053C	P38235	PTP1	YDL230W	1008 nt		12.65	□□□□□ -0.38
YBR053C	P38235	YPR011C	YPR011C	981 nt		12.65	□□□□□ -0.38
YBR053C	P38235	DSK2	YMR276W	1122 nt		12.62	□□□□□ -0.39
YBR053C	P38235	TIR4	YOR009W	1464 nt		12.59	□□□□□ -0.39
YBR053C	P38235	DCW1	YKL046C	1350 nt		12.59	□□□□□ -0.39
YBR053C	P38235	IMP2'	YIL154C	1041 nt		12.58	□□□□□ -0.4
YBR053C	P38235	ART5	YGR068C	1761 nt		12.58	□□□□□ -0.4
YBR053C	P38235	YCH1	YGR203W	447 nt		12.57	□□□□□ -0.4
YBR053C	P38235	YLR236C	YLR236C	324 nt		12.57	□□□□□ -0.4
YBR053C	P38235	CAC2	YML102W	1407 nt		12.54	□□□□□ -0.4
YBR053C	P38235	FMP45	YDL222C	930 nt		12.53	□□□□□ -0.4
YBR053C	P38235	PET9	YBL030C	957 nt		12.51	□□□□□ -0.41
YBR053C	P38235	YMR057C	YMR057C	372 nt		12.5	□□□□□ -0.41
YBR053C	P38235	GFD2	YCL036W	1701 nt		12.49	□□□□□ -0.41
YBR053C	P38235	MOT3	YMR070W	1473 nt		12.49	□□□□□ -0.41
YBR053C	P38235	IDH1	YNL037C	1083 nt		12.46	□□□□□ -0.41
YBR053C	P38235	EMI2	YDR516C	1503 nt		12.44	□□□□□ -0.42
YBR053C	P38235	LPX1	YOR084W	1164 nt		12.37	□□□□□ -0.43
YBR053C	P38235	GBP2	YCL011C	1284 nt		12.36	□□□□□ -0.43
YBR053C	P38235	YDR433W	YDR433W	441 nt		12.35	□□□□□ -0.43
YBR053C	P38235	YCL048W-A	YCL048W-A	240 nt		12.35	□□□□□ -0.43
YBR053C	P38235	SSA4	YER103W	1929 nt		12.35	□□□□□ -0.43
YBR053C	P38235	YDL221W	YDL221W	552 nt		12.34	□□□□□ -0.43
YBR053C	P38235	ERV46	YAL042W	1248 nt		12.34	□□□□□ -0.43
YBR053C	P38235	IRC15	YPL017C	1500 nt		12.33	□□□□□ -0.44
YBR053C	P38235	YMR090W	YMR090W	684 nt		12.33	□□□□□ -0.44
YBR053C	P38235	RTS2	YOR077W	699 nt		12.33	□□□□□ -0.44
YBR053C	P38235	FPS1	YLL043W	2010 nt		12.28	□□□□□ -0.44
YBR053C	P38235	YKR040C	YKR040C	504 nt		12.27	□□□□□ -0.45
YBR053C	P38235	MXR2	YCL033C	507 nt		12.27	□□□□□ -0.45
YBR053C	P38235	GIS3	YLR094C	1509 nt		12.25	□□□□□ -0.45
YBR053C	P38235	SPP1	YPL138C	1062 nt		12.22	□□□□□ -0.45
YBR053C	P38235	TCD2	YKL027W	1344 nt		12.2	□□□□□ -0.46
YBR053C	P38235	CUE1	YMR264W	612 nt		12.2	□□□□□ -0.46
YBR053C	P38235	SDH1	YKL148C	1923 nt		12.17	□□□□□ -0.46
YBR053C	P38235	YBR220C	YBR220C	1683 nt		12.16	□□□□□ -0.46
YBR053C	P38235	DED1	YOR204W	1815 nt		12.16	□□□□□ -0.46
YBR053C	P38235	RRD1	YIL153W	1182 nt		12.15	□□□□□ -0.46
YBR053C	P38235	SCC4	YER147C	1875 nt		12.13	□□□□□ -0.47
YBR053C	P38235	YIL100W	YIL100W	354 nt		12.06	□□□□□ -0.48
YBR053C	P38235	FMT1	YBL013W	1206 nt		12.05	□□□□□ -0.48
YBR053C	P38235	FRD1	YEL047C	1413 nt		12.02	□□□□□ -0.49
YBR053C	P38235	MRPL8	YJL063C	717 nt		12.01	□□□□□ -0.49
YBR053C	P38235	RTG1	YOL067C	534 nt		11.98	□□□□□ -0.49
YBR053C	P38235	YCL042W	YCL042W	360 nt		11.97	□□□□□ -0.49
YBR053C	P38235	YEL076C-A	YEL076C-A	651 nt		11.93	□□□□□ -0.5
YBR053C	P38235	YEL076C	YEL076C	651 nt		11.93	□□□□□ -0.5
YBR053C	P38235	YLR464W	YLR464W	651 nt		11.93	□□□□□ -0.5
YBR053C	P38235	SOR2	YDL246C	1074 nt		11.92	□□□□□ -0.5
YBR053C	P38235	FMP52	YER004W	696 nt		11.92	□□□□□ -0.5
YBR053C	P38235	SOR1	YJR159W	1074 nt		11.92	□□□□□ -0.5
YBR053C	P38235	CWP1	YKL096W	720 nt		11.9	□□□□□ -0.5
YBR053C	P38235	ADO1	YJR105W	1023 nt		11.89	□□□□□ -0.51
YBR053C	P38235	PTH1	YHR189W	573 nt		11.87	□□□□□ -0.51
YBR053C	P38235	ADH2	YMR303C	1047 nt		11.87	□□□□□ -0.51
YBR053C	P38235	RRT12	YCR045C	1476 nt		11.86	□□□□□ -0.51
YBR053C	P38235	YNL195C	YNL195C	786 nt		11.85	□□□□□ -0.51
YBR053C	P38235	BDF1	YLR399C	2061 nt		11.84	□□□□□ -0.51
YBR053C	P38235	PCM1	YEL058W	1674 nt		11.81	□□□□□ -0.52
YBR053C	P38235	YSC84	YHR016C	1407 nt		11.81	□□□□□ -0.52
YBR053C	P38235	YLR235C	YLR235C	399 nt		11.78	□□□□□ -0.52
YBR053C	P38235	YHL050C	YHL050C	2094 nt		11.77	□□□□□ -0.52
YBR053C	P38235	HUA1	YGR268C	597 nt		11.75	□□□□□ -0.53
YBR053C	P38235	SNF6	YHL025W	999 nt		11.75	□□□□□ -0.53
YBR053C	P38235	YKL030W	YKL030W	606 nt		11.75	□□□□□ -0.53
YBR053C	P38235	LCB1	YMR296C	1677 nt		11.71	□□□□□ -0.54
YBR053C	P38235	TAT1	YBR069C	1860 nt		11.67	□□□□□ -0.54
YBR053C	P38235	Q0182	Q0182	405 nt		11.66	□□□□□ -0.54
YBR053C	P38235	SEC11	YIR022W	504 nt		11.66	□□□□□ -0.54
YBR053C	P38235	DIC1	YLR348C	897 nt		11.66	□□□□□ -0.54
YBR053C	P38235	RNQ1	YCL028W	1218 nt		11.65	□□□□□ -0.54
YBR053C	P38235	YIH1	YCR059C	777 nt		11.63	□□□□□ -0.55
YBR053C	P38235	TIM23	YNR017W	669 nt		11.63	□□□□□ -0.55
YBR053C	P38235	UBX6	YJL048C	1191 nt		11.61	□□□□□ -0.55
YBR053C	P38235	SIM1	YIL123W	1431 nt		11.59	□□□□□ -0.55
YBR053C	P38235	PCH2	YBR186W	1695 nt		11.59	□□□□□ -0.55
YBR053C	P38235	YLR179C	YLR179C	606 nt		11.57	□□□□□ -0.56
YBR053C	P38235	BIO4	YNR057C	714 nt		11.57	□□□□□ -0.56
YBR053C	P38235	YLL053C	YLL053C	459 nt		11.55	□□□□□ -0.56
YBR053C	P38235	GUT2	YIL155C	1950 nt		11.51	□□□□□ -0.57
YBR053C	P38235	YDR094W	YDR094W	336 nt		11.5	□□□□□ -0.57
YBR053C	P38235	YPR064W	YPR064W	420 nt		11.48	□□□□□ -0.57
YBR053C	P38235	FTR1	YER145C	1215 nt		11.47	□□□□□ -0.57
YBR053C	P38235	WSC2	YNL283C	1512 nt		11.45	□□□□□ -0.58
YBR053C	P38235	NCP1	YHR042W	2076 nt		11.45	□□□□□ -0.58
YBR053C	P38235	AHT1	YHR093W	549 nt		11.45	□□□□□ -0.58
YBR053C	P38235	GAL1	YBR020W	1587 nt		11.43	□□□□□ -0.58
YBR053C	P38235	tL(GAG)G	tL(GAG)G	82 nt		11.43	□□□□□ -0.58
YBR053C	P38235	TAD3	YLR316C	969 nt		11.43	□□□□□ -0.58
YBR053C	P38235	TRM5	YHR070W	1500 nt		11.41	□□□□□ -0.58
YBR053C	P38235	AQY1	YPR192W	918 nt		11.39	□□□□□ -0.59
YBR053C	P38235	ATF2	YGR177C	1608 nt		11.38	□□□□□ -0.59
YBR053C	P38235	BOP3	YNL042W	1191 nt		11.37	□□□□□ -0.59
YBR053C	P38235	PIB2	YGL023C	1908 nt		11.37	□□□□□ -0.59
YBR053C	P38235	ERF2	YLR246W	1080 nt		11.36	□□□□□ -0.59
YBR053C	P38235	RTF1	YGL244W	1677 nt		11.36	□□□□□ -0.59

Retrieved 100 of 7,029 protein–RNA pairs in 8.3 ms