Protein–RNA interactions for Protein: P34110

VPS35, Vacuolar protein sorting-associated protein 35, yeastyeast

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS35P34110 WHI5YOR083W 888 nt13.53□□□□□ -0.24
VPS35P34110 PUS2YGL063W 1113 nt13.5□□□□□ -0.25
VPS35P34110 MEP2YNL142W 1500 nt13.44□□□□□ -0.26
VPS35P34110 YLR154C-GYLR154C-G 150 nt13.43□□□□□ -0.26
VPS35P34110 SIS1YNL007C 1059 nt13.41□□□□□ -0.26
VPS35P34110 RPP2AYOL039W 321 nt13.36□□□□□ -0.27
VPS35P34110 YJL152WYJL152W 360 nt13.33□□□□□ -0.28
VPS35P34110 IMP2'YIL154C 1041 nt13.32□□□□□ -0.28
VPS35P34110 DCW1YKL046C 1350 nt13.3□□□□□ -0.28
VPS35P34110 DSK2YMR276W 1122 nt13.27□□□□□ -0.29
VPS35P34110 YCH1YGR203W 447 nt13.21□□□□□ -0.29
VPS35P34110 PTP1YDL230W 1008 nt13.19□□□□□ -0.3
VPS35P34110 TIR4YOR009W 1464 nt13.16□□□□□ -0.3
VPS35P34110 PET9YBL030C 957 nt13.15□□□□□ -0.3
VPS35P34110 IDH1YNL037C 1083 nt13.15□□□□□ -0.3
VPS35P34110 ART5YGR068C 1761 nt13.15□□□□□ -0.31
VPS35P34110 FMP45YDL222C 930 nt13.14□□□□□ -0.31
VPS35P34110 YLR236CYLR236C 324 nt13.11□□□□□ -0.31
VPS35P34110 BDF1YLR399C 2061 nt13.11□□□□□ -0.31
VPS35P34110 YPR011CYPR011C 981 nt13.09□□□□□ -0.31
VPS35P34110 GFD2YCL036W 1701 nt13.07□□□□□ -0.32
VPS35P34110 CAC2YML102W 1407 nt13.05□□□□□ -0.32
VPS35P34110 EMI2YDR516C 1503 nt13.05□□□□□ -0.32
VPS35P34110 YMR057CYMR057C 372 nt13.05□□□□□ -0.32
VPS35P34110 YMR090WYMR090W 684 nt13.05□□□□□ -0.32
VPS35P34110 YCL048W-AYCL048W-A 240 nt13.03□□□□□ -0.32
VPS35P34110 GBP2YCL011C 1284 nt12.99□□□□□ -0.33
VPS35P34110 YDR433WYDR433W 441 nt12.97□□□□□ -0.33
VPS35P34110 YDL221WYDL221W 552 nt12.95□□□□□ -0.34
VPS35P34110 YBR220CYBR220C 1683 nt12.95□□□□□ -0.34
VPS35P34110 ERV46YAL042W 1248 nt12.94□□□□□ -0.34
VPS35P34110 PAC11YDR488C 1602 nt12.92□□□□□ -0.34
VPS35P34110 LPX1YOR084W 1164 nt12.92□□□□□ -0.34
VPS35P34110 TAT1YBR069C 1860 nt12.91□□□□□ -0.34
VPS35P34110 RTS2YOR077W 699 nt12.89□□□□□ -0.35
VPS35P34110 YKR040CYKR040C 504 nt12.87□□□□□ -0.35
VPS35P34110 IRC15YPL017C 1500 nt12.86□□□□□ -0.35
VPS35P34110 TCD2YKL027W 1344 nt12.85□□□□□ -0.35
VPS35P34110 SDH1YKL148C 1923 nt12.82□□□□□ -0.36
VPS35P34110 CUE1YMR264W 612 nt12.82□□□□□ -0.36
VPS35P34110 FPS1YLL043W 2010 nt12.81□□□□□ -0.36
VPS35P34110 GIS3YLR094C 1509 nt12.78□□□□□ -0.36
VPS35P34110 NVJ2YPR091C 2313 nt12.78□□□□□ -0.36
VPS35P34110 MXR2YCL033C 507 nt12.77□□□□□ -0.37
VPS35P34110 YIL100WYIL100W 354 nt12.73□□□□□ -0.37
VPS35P34110 SCC4YER147C 1875 nt12.72□□□□□ -0.37
VPS35P34110 RRD1YIL153W 1182 nt12.68□□□□□ -0.38
VPS35P34110 SPP1YPL138C 1062 nt12.67□□□□□ -0.38
VPS35P34110 MRPL8YJL063C 717 nt12.66□□□□□ -0.38
VPS35P34110 DED1YOR204W 1815 nt12.65□□□□□ -0.39
VPS35P34110 YCL042WYCL042W 360 nt12.62□□□□□ -0.39
VPS35P34110 FMP52YER004W 696 nt12.59□□□□□ -0.39
VPS35P34110 ADO1YJR105W 1023 nt12.56□□□□□ -0.4
VPS35P34110 FRD1YEL047C 1413 nt12.55□□□□□ -0.4
VPS35P34110 YNL195CYNL195C 786 nt12.55□□□□□ -0.4
VPS35P34110 YEL076C-AYEL076C-A 651 nt12.52□□□□□ -0.41
VPS35P34110 YEL076CYEL076C 651 nt12.52□□□□□ -0.41
VPS35P34110 YLR464WYLR464W 651 nt12.52□□□□□ -0.41
VPS35P34110 SOR2YDL246C 1074 nt12.51□□□□□ -0.41
VPS35P34110 SOR1YJR159W 1074 nt12.51□□□□□ -0.41
VPS35P34110 FMT1YBL013W 1206 nt12.51□□□□□ -0.41
VPS35P34110 RTG1YOL067C 534 nt12.49□□□□□ -0.41
VPS35P34110 PCH2YBR186W 1695 nt12.48□□□□□ -0.41
VPS35P34110 CWP1YKL096W 720 nt12.47□□□□□ -0.41
VPS35P34110 YSC84YHR016C 1407 nt12.46□□□□□ -0.41
VPS35P34110 GUT2YIL155C 1950 nt12.45□□□□□ -0.42
VPS35P34110 YLR235CYLR235C 399 nt12.43□□□□□ -0.42
VPS35P34110 YHL050CYHL050C 2094 nt12.42□□□□□ -0.42
VPS35P34110 SEC11YIR022W 504 nt12.41□□□□□ -0.42
VPS35P34110 RRT12YCR045C 1476 nt12.4□□□□□ -0.43
VPS35P34110 HUA1YGR268C 597 nt12.39□□□□□ -0.43
VPS35P34110 PTH1YHR189W 573 nt12.39□□□□□ -0.43
VPS35P34110 ADH2YMR303C 1047 nt12.39□□□□□ -0.43
VPS35P34110 NME1NME1 340 nt12.37□□□□□ -0.43
VPS35P34110 PCM1YEL058W 1674 nt12.37□□□□□ -0.43
VPS35P34110 SNF6YHL025W 999 nt12.36□□□□□ -0.43
VPS35P34110 YKL030WYKL030W 606 nt12.36□□□□□ -0.43
VPS35P34110 PIB2YGL023C 1908 nt12.33□□□□□ -0.44
VPS35P34110 LCB1YMR296C 1677 nt12.25□□□□□ -0.45
VPS35P34110 DIC1YLR348C 897 nt12.24□□□□□ -0.45
VPS35P34110 RNQ1YCL028W 1218 nt12.23□□□□□ -0.45
VPS35P34110 YIH1YCR059C 777 nt12.21□□□□□ -0.45
VPS35P34110 TIM23YNR017W 669 nt12.21□□□□□ -0.45
VPS35P34110 SIM1YIL123W 1431 nt12.17□□□□□ -0.46
VPS35P34110 RTF1YGL244W 1677 nt12.16□□□□□ -0.46
VPS35P34110 YLR179CYLR179C 606 nt12.15□□□□□ -0.46
VPS35P34110 BIO4YNR057C 714 nt12.11□□□□□ -0.47
VPS35P34110 YPR064WYPR064W 420 nt12.1□□□□□ -0.47
VPS35P34110 YLL053CYLL053C 459 nt12.09□□□□□ -0.47
VPS35P34110 UBX6YJL048C 1191 nt12.07□□□□□ -0.48
VPS35P34110 AQY1YPR192W 918 nt12.06□□□□□ -0.48
VPS35P34110 NCP1YHR042W 2076 nt12.06□□□□□ -0.48
VPS35P34110 YDR094WYDR094W 336 nt12.05□□□□□ -0.48
VPS35P34110 tL(GAG)GtL(GAG)G 82 nt12.05□□□□□ -0.48
VPS35P34110 BOP3YNL042W 1191 nt12.05□□□□□ -0.48
VPS35P34110 PTK1YKL198C 1989 nt12.05□□□□□ -0.48
VPS35P34110 FTR1YER145C 1215 nt12.02□□□□□ -0.49
VPS35P34110 TAD3YLR316C 969 nt12□□□□□ -0.49
VPS35P34110 AHT1YHR093W 549 nt11.99□□□□□ -0.49
VPS35P34110 GAL1YBR020W 1587 nt11.98□□□□□ -0.49
Retrieved 100 of 7,029 protein–RNA pairs in 7 ms