Protein–RNA interactions for Protein: P31385

DEP1, Transcriptional regulatory protein DEP1, yeastyeast

Predictions only

Length 405 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEP1P31385 BOP3YNL042W 1191 nt12.79□□□□□ -0.36
DEP1P31385 RRT12YCR045C 1476 nt12.73□□□□□ -0.37
DEP1P31385 TRM9YML014W 840 nt12.73□□□□□ -0.37
DEP1P31385 UME6YDR207C 2511 nt12.72□□□□□ -0.37
DEP1P31385 SRB2YHR041C 633 nt12.72□□□□□ -0.37
DEP1P31385 GFD2YCL036W 1701 nt12.71□□□□□ -0.38
DEP1P31385 BOR1YNL275W 1731 nt12.67□□□□□ -0.38
DEP1P31385 CCT6YDR188W 1641 nt12.66□□□□□ -0.38
DEP1P31385 YJL225CYJL225C 5277 nt12.66□□□□□ -0.38
DEP1P31385 ART5YGR068C 1761 nt12.66□□□□□ -0.38
DEP1P31385 RTS2YOR077W 699 nt12.65□□□□□ -0.38
DEP1P31385 SUF2tP(AGG)C 72 nt12.6□□□□□ -0.39
DEP1P31385 SUF10tP(AGG)N 72 nt12.6□□□□□ -0.39
DEP1P31385 CUE1YMR264W 612 nt12.56□□□□□ -0.4
DEP1P31385 YNL195CYNL195C 786 nt12.55□□□□□ -0.4
DEP1P31385 PET9YBL030C 957 nt12.53□□□□□ -0.4
DEP1P31385 NCP1YHR042W 2076 nt12.52□□□□□ -0.41
DEP1P31385 LSM3YLR438C-A 270 nt12.48□□□□□ -0.41
DEP1P31385 PST2YDR032C 597 nt12.47□□□□□ -0.41
DEP1P31385 YFL054CYFL054C 1941 nt12.46□□□□□ -0.42
DEP1P31385 SPT8YLR055C 1809 nt12.44□□□□□ -0.42
DEP1P31385 YIL100WYIL100W 354 nt12.39□□□□□ -0.43
DEP1P31385 YCH1YGR203W 447 nt12.36□□□□□ -0.43
DEP1P31385 WWM1YFL010C 636 nt12.32□□□□□ -0.44
DEP1P31385 MCH5YOR306C 1566 nt12.3□□□□□ -0.44
DEP1P31385 TIR4YOR009W 1464 nt12.26□□□□□ -0.45
DEP1P31385 HSP60YLR259C 1719 nt12.25□□□□□ -0.45
DEP1P31385 ALG12YNR030W 1656 nt12.25□□□□□ -0.45
DEP1P31385 YMR057CYMR057C 372 nt12.24□□□□□ -0.45
DEP1P31385 YLR236CYLR236C 324 nt12.2□□□□□ -0.46
DEP1P31385 SWE1YJL187C 2460 nt12.15□□□□□ -0.46
DEP1P31385 YFL021C-AYFL021C-A 855 nt12.14□□□□□ -0.47
DEP1P31385 LCB1YMR296C 1677 nt12.13□□□□□ -0.47
DEP1P31385 YGR021WYGR021W 873 nt12.08□□□□□ -0.48
DEP1P31385 RDN37-1RDN37-1 5354 nt12.05□□□□□ -0.48
DEP1P31385 RDN37-2RDN37-2 5354 nt12.05□□□□□ -0.48
DEP1P31385 GLK1YCL040W 1503 nt12.05□□□□□ -0.48
DEP1P31385 SHU1YHL006C 453 nt12.01□□□□□ -0.49
DEP1P31385 LYS4YDR234W 2082 nt11.92□□□□□ -0.5
DEP1P31385 HOM6YJR139C 1080 nt11.92□□□□□ -0.5
DEP1P31385 YKL097CYKL097C 411 nt11.89□□□□□ -0.51
DEP1P31385 YAL037C-BYAL037C-B 975 nt11.87□□□□□ -0.51
DEP1P31385 NAR1YNL240C 1476 nt11.85□□□□□ -0.51
DEP1P31385 FUR4YBR021W 1902 nt11.85□□□□□ -0.51
DEP1P31385 DSK2YMR276W 1122 nt11.84□□□□□ -0.51
DEP1P31385 YCL048W-AYCL048W-A 240 nt11.83□□□□□ -0.52
DEP1P31385 BIO4YNR057C 714 nt11.81□□□□□ -0.52
DEP1P31385 NPL3YDR432W 1245 nt11.8□□□□□ -0.52
DEP1P31385 AAC1YMR056C 930 nt11.78□□□□□ -0.52
DEP1P31385 SIM1YIL123W 1431 nt11.77□□□□□ -0.52
DEP1P31385 PRP4YPR178W 1398 nt11.77□□□□□ -0.53
DEP1P31385 MNP1YGL068W 585 nt11.76□□□□□ -0.53
DEP1P31385 RKM5YLR137W 1104 nt11.76□□□□□ -0.53
DEP1P31385 YEL076C-AYEL076C-A 651 nt11.72□□□□□ -0.53
DEP1P31385 YEL076CYEL076C 651 nt11.72□□□□□ -0.53
DEP1P31385 YJL152WYJL152W 360 nt11.72□□□□□ -0.53
DEP1P31385 YLR464WYLR464W 651 nt11.72□□□□□ -0.53
DEP1P31385 DPS1YLL018C 1674 nt11.71□□□□□ -0.54
DEP1P31385 BIO5YNR056C 1686 nt11.65□□□□□ -0.55
DEP1P31385 PCM1YEL058W 1674 nt11.63□□□□□ -0.55
DEP1P31385 PBP1YGR178C 2169 nt11.63□□□□□ -0.55
DEP1P31385 YLR154C-GYLR154C-G 150 nt11.62□□□□□ -0.55
DEP1P31385 YOL037CYOL037C 354 nt11.6□□□□□ -0.55
DEP1P31385 FMP52YER004W 696 nt11.59□□□□□ -0.55
DEP1P31385 RRD1YIL153W 1182 nt11.58□□□□□ -0.56
DEP1P31385 CYT2YKL087C 675 nt11.58□□□□□ -0.56
DEP1P31385 YHR056W-AYHR056W-A 435 nt11.57□□□□□ -0.56
DEP1P31385 CCA1YER168C 1641 nt11.57□□□□□ -0.56
DEP1P31385 SNF1YDR477W 1902 nt11.56□□□□□ -0.56
DEP1P31385 BMT6YLR063W 1098 nt11.54□□□□□ -0.56
DEP1P31385 CMP2YML057W 1815 nt11.51□□□□□ -0.57
DEP1P31385 YKR005CYKR005C 1578 nt11.5□□□□□ -0.57
DEP1P31385 CRR1YLR213C 1269 nt11.49□□□□□ -0.57
DEP1P31385 ERF2YLR246W 1080 nt11.48□□□□□ -0.57
DEP1P31385 HSL7YBR133C 2484 nt11.48□□□□□ -0.57
DEP1P31385 RAX1YOR301W 1308 nt11.45□□□□□ -0.58
DEP1P31385 SNF6YHL025W 999 nt11.41□□□□□ -0.58
DEP1P31385 DED1YOR204W 1815 nt11.41□□□□□ -0.58
DEP1P31385 FMT1YBL013W 1206 nt11.39□□□□□ -0.59
DEP1P31385 ADH2YMR303C 1047 nt11.39□□□□□ -0.59
DEP1P31385 MIC10YCL057C-A 294 nt11.38□□□□□ -0.59
DEP1P31385 WSC2YNL283C 1512 nt11.37□□□□□ -0.59
DEP1P31385 IRC24YIR036C 792 nt11.37□□□□□ -0.59
DEP1P31385 HEM12YDR047W 1089 nt11.36□□□□□ -0.59
DEP1P31385 YOR139CYOR139C 393 nt11.36□□□□□ -0.59
DEP1P31385 RPM1RPM1 483 nt11.35□□□□□ -0.59
DEP1P31385 CWP1YKL096W 720 nt11.34□□□□□ -0.59
DEP1P31385 YGR259CYGR259C 441 nt11.33□□□□□ -0.6
DEP1P31385 SNG1YGR197C 1644 nt11.29□□□□□ -0.6
DEP1P31385 TCD2YKL027W 1344 nt11.29□□□□□ -0.6
DEP1P31385 RDN25-1RDN25-1 3396 nt11.28□□□□□ -0.6
DEP1P31385 RDN25-2RDN25-2 3396 nt11.28□□□□□ -0.6
DEP1P31385 WHI5YOR083W 888 nt11.28□□□□□ -0.6
DEP1P31385 GBP2YCL011C 1284 nt11.28□□□□□ -0.6
DEP1P31385 YAT1YAR035W 2064 nt11.28□□□□□ -0.6
DEP1P31385 ATF2YGR177C 1608 nt11.27□□□□□ -0.6
DEP1P31385 YLR281CYLR281C 468 nt11.26□□□□□ -0.61
DEP1P31385 YCL074WYCL074W 927 nt11.24□□□□□ -0.61
DEP1P31385 YIH1YCR059C 777 nt11.24□□□□□ -0.61
DEP1P31385 YLL053CYLL053C 459 nt11.24□□□□□ -0.61
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms