Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 DCW1YKL046C 1350 nt12.66□□□□□ -0.38
MSH2P25847 CCT6YDR188W 1641 nt12.59□□□□□ -0.39
MSH2P25847 MRPL8YJL063C 717 nt12.57□□□□□ -0.4
MSH2P25847 PAC11YDR488C 1602 nt12.57□□□□□ -0.4
MSH2P25847 SUF2tP(AGG)C 72 nt12.54□□□□□ -0.4
MSH2P25847 SUF10tP(AGG)N 72 nt12.54□□□□□ -0.4
MSH2P25847 RPP2AYOL039W 321 nt12.53□□□□□ -0.4
MSH2P25847 BDF1YLR399C 2061 nt12.51□□□□□ -0.41
MSH2P25847 FMP45YDL222C 930 nt12.51□□□□□ -0.41
MSH2P25847 EMI2YDR516C 1503 nt12.49□□□□□ -0.41
MSH2P25847 DSK2YMR276W 1122 nt12.49□□□□□ -0.41
MSH2P25847 YPR011CYPR011C 981 nt12.49□□□□□ -0.41
MSH2P25847 PTP1YDL230W 1008 nt12.47□□□□□ -0.41
MSH2P25847 IMP2'YIL154C 1041 nt12.45□□□□□ -0.42
MSH2P25847 SIS1YNL007C 1059 nt12.45□□□□□ -0.42
MSH2P25847 YCH1YGR203W 447 nt12.44□□□□□ -0.42
MSH2P25847 CAC2YML102W 1407 nt12.44□□□□□ -0.42
MSH2P25847 YMR090WYMR090W 684 nt12.43□□□□□ -0.42
MSH2P25847 YLR236CYLR236C 324 nt12.42□□□□□ -0.42
MSH2P25847 NVJ2YPR091C 2313 nt12.4□□□□□ -0.42
MSH2P25847 YDL221WYDL221W 552 nt12.37□□□□□ -0.43
MSH2P25847 ADO1YJR105W 1023 nt12.33□□□□□ -0.44
MSH2P25847 YLR154C-GYLR154C-G 150 nt12.33□□□□□ -0.44
MSH2P25847 ART5YGR068C 1761 nt12.3□□□□□ -0.44
MSH2P25847 TAT1YBR069C 1860 nt12.3□□□□□ -0.44
MSH2P25847 YBR220CYBR220C 1683 nt12.28□□□□□ -0.44
MSH2P25847 GFD2YCL036W 1701 nt12.26□□□□□ -0.45
MSH2P25847 YEL076C-AYEL076C-A 651 nt12.25□□□□□ -0.45
MSH2P25847 YEL076CYEL076C 651 nt12.25□□□□□ -0.45
MSH2P25847 YLR464WYLR464W 651 nt12.25□□□□□ -0.45
MSH2P25847 UBX6YJL048C 1191 nt12.24□□□□□ -0.45
MSH2P25847 SDH1YKL148C 1923 nt12.23□□□□□ -0.45
MSH2P25847 IRC15YPL017C 1500 nt12.23□□□□□ -0.45
MSH2P25847 TIR4YOR009W 1464 nt12.22□□□□□ -0.45
MSH2P25847 PET9YBL030C 957 nt12.22□□□□□ -0.45
MSH2P25847 RTS2YOR077W 699 nt12.22□□□□□ -0.45
MSH2P25847 ERV46YAL042W 1248 nt12.18□□□□□ -0.46
MSH2P25847 YJL152WYJL152W 360 nt12.17□□□□□ -0.46
MSH2P25847 LPX1YOR084W 1164 nt12.17□□□□□ -0.46
MSH2P25847 RTG1YOL067C 534 nt12.16□□□□□ -0.46
MSH2P25847 GIS3YLR094C 1509 nt12.16□□□□□ -0.46
MSH2P25847 SCC4YER147C 1875 nt12.15□□□□□ -0.46
MSH2P25847 YMR057CYMR057C 372 nt12.14□□□□□ -0.47
MSH2P25847 SPP1YPL138C 1062 nt12.13□□□□□ -0.47
MSH2P25847 IDH1YNL037C 1083 nt12.05□□□□□ -0.48
MSH2P25847 CUE1YMR264W 612 nt12.04□□□□□ -0.48
MSH2P25847 YKR040CYKR040C 504 nt12□□□□□ -0.49
MSH2P25847 YCL048W-AYCL048W-A 240 nt11.98□□□□□ -0.49
MSH2P25847 FPS1YLL043W 2010 nt11.98□□□□□ -0.49
MSH2P25847 YDR433WYDR433W 441 nt11.97□□□□□ -0.49
MSH2P25847 YDR094WYDR094W 336 nt11.94□□□□□ -0.5
MSH2P25847 YIL100WYIL100W 354 nt11.94□□□□□ -0.5
MSH2P25847 HUA1YGR268C 597 nt11.91□□□□□ -0.5
MSH2P25847 YSC84YHR016C 1407 nt11.9□□□□□ -0.5
MSH2P25847 YFL015W-AYFL015W-A 318 nt11.88□□□□□ -0.51
MSH2P25847 SEC11YIR022W 504 nt11.87□□□□□ -0.51
MSH2P25847 YNL195CYNL195C 786 nt11.86□□□□□ -0.51
MSH2P25847 GBP2YCL011C 1284 nt11.86□□□□□ -0.51
MSH2P25847 RRT12YCR045C 1476 nt11.83□□□□□ -0.52
MSH2P25847 PCH2YBR186W 1695 nt11.82□□□□□ -0.52
MSH2P25847 MXR2YCL033C 507 nt11.82□□□□□ -0.52
MSH2P25847 GUT2YIL155C 1950 nt11.79□□□□□ -0.52
MSH2P25847 YHL050CYHL050C 2094 nt11.77□□□□□ -0.52
MSH2P25847 TCD2YKL027W 1344 nt11.68□□□□□ -0.54
MSH2P25847 RRD1YIL153W 1182 nt11.67□□□□□ -0.54
MSH2P25847 PIB2YGL023C 1908 nt11.65□□□□□ -0.54
MSH2P25847 FRD1YEL047C 1413 nt11.61□□□□□ -0.55
MSH2P25847 DED1YOR204W 1815 nt11.59□□□□□ -0.55
MSH2P25847 RTF1YGL244W 1677 nt11.56□□□□□ -0.56
MSH2P25847 YKL030WYKL030W 606 nt11.56□□□□□ -0.56
MSH2P25847 FMP52YER004W 696 nt11.54□□□□□ -0.56
MSH2P25847 FMT1YBL013W 1206 nt11.53□□□□□ -0.56
MSH2P25847 BOP3YNL042W 1191 nt11.53□□□□□ -0.56
MSH2P25847 PTH1YHR189W 573 nt11.52□□□□□ -0.57
MSH2P25847 SBA1YKL117W 651 nt11.52□□□□□ -0.57
MSH2P25847 YLR235CYLR235C 399 nt11.52□□□□□ -0.57
MSH2P25847 UME6YDR207C 2511 nt11.5□□□□□ -0.57
MSH2P25847 CWP1YKL096W 720 nt11.49□□□□□ -0.57
MSH2P25847 PCM1YEL058W 1674 nt11.47□□□□□ -0.57
MSH2P25847 SOR2YDL246C 1074 nt11.46□□□□□ -0.57
MSH2P25847 SOR1YJR159W 1074 nt11.46□□□□□ -0.57
MSH2P25847 ADH2YMR303C 1047 nt11.46□□□□□ -0.57
MSH2P25847 PAU16YKL224C 372 nt11.45□□□□□ -0.58
MSH2P25847 YCL042WYCL042W 360 nt11.45□□□□□ -0.58
MSH2P25847 YJL225CYJL225C 5277 nt11.44□□□□□ -0.58
MSH2P25847 LCB1YMR296C 1677 nt11.43□□□□□ -0.58
MSH2P25847 NCP1YHR042W 2076 nt11.42□□□□□ -0.58
MSH2P25847 YFR018CYFR018C 1092 nt11.41□□□□□ -0.58
MSH2P25847 SNF6YHL025W 999 nt11.41□□□□□ -0.58
MSH2P25847 SIM1YIL123W 1431 nt11.41□□□□□ -0.58
MSH2P25847 PTK1YKL198C 1989 nt11.39□□□□□ -0.59
MSH2P25847 RRT5YFR032C 870 nt11.35□□□□□ -0.59
MSH2P25847 tL(GAG)GtL(GAG)G 82 nt11.32□□□□□ -0.6
MSH2P25847 BIO4YNR057C 714 nt11.31□□□□□ -0.6
MSH2P25847 PRE6YOL038W 765 nt11.28□□□□□ -0.6
MSH2P25847 RDN37-1RDN37-1 5354 nt11.23□□□□□ -0.61
MSH2P25847 RDN37-2RDN37-2 5354 nt11.23□□□□□ -0.61
MSH2P25847 YIH1YCR059C 777 nt11.23□□□□□ -0.61
MSH2P25847 TIM23YNR017W 669 nt11.23□□□□□ -0.61
MSH2P25847 YFL054CYFL054C 1941 nt11.23□□□□□ -0.61
Retrieved 100 of 7,029 protein–RNA pairs in 12.2 ms