Protein–RNA interactions for Protein: P25808

SPB4, ATP-dependent rRNA helicase SPB4, yeastyeast

Predicted RBP Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPB4P25808 TAT1YBR069C 1860 nt14.21□□□□□ -0.14
SPB4P25808 FMP45YDL222C 930 nt14.18□□□□□ -0.14
SPB4P25808 YPR011CYPR011C 981 nt14.17□□□□□ -0.14
SPB4P25808 YPS1YLR120C 1710 nt14.13□□□□□ -0.15
SPB4P25808 DSK2YMR276W 1122 nt14.13□□□□□ -0.15
SPB4P25808 PAU21YOR394W 495 nt14.11□□□□□ -0.15
SPB4P25808 PAU22YPL282C 495 nt14.11□□□□□ -0.15
SPB4P25808 ALF1YNL148C 765 nt14.1□□□□□ -0.15
SPB4P25808 MEP2YNL142W 1500 nt14.1□□□□□ -0.15
SPB4P25808 YDR095CYDR095C 411 nt14.09□□□□□ -0.15
SPB4P25808 YLR154C-GYLR154C-G 150 nt14.09□□□□□ -0.15
SPB4P25808 YLR236CYLR236C 324 nt14.09□□□□□ -0.15
SPB4P25808 YCH1YGR203W 447 nt14.02□□□□□ -0.17
SPB4P25808 IMP2'YIL154C 1041 nt14.02□□□□□ -0.17
SPB4P25808 SUF2tP(AGG)C 72 nt14.01□□□□□ -0.17
SPB4P25808 SUF10tP(AGG)N 72 nt14.01□□□□□ -0.17
SPB4P25808 YHR165W-AYHR165W-A 312 nt13.97□□□□□ -0.17
SPB4P25808 MET8YBR213W 825 nt13.96□□□□□ -0.17
SPB4P25808 YJL152WYJL152W 360 nt13.95□□□□□ -0.18
SPB4P25808 SIS1YNL007C 1059 nt13.92□□□□□ -0.18
SPB4P25808 ARO7YPR060C 771 nt13.92□□□□□ -0.18
SPB4P25808 TIR4YOR009W 1464 nt13.87□□□□□ -0.19
SPB4P25808 DCW1YKL046C 1350 nt13.85□□□□□ -0.19
SPB4P25808 MRPL8YJL063C 717 nt13.85□□□□□ -0.19
SPB4P25808 LPX1YOR084W 1164 nt13.85□□□□□ -0.19
SPB4P25808 PAC11YDR488C 1602 nt13.82□□□□□ -0.2
SPB4P25808 RPP2AYOL039W 321 nt13.81□□□□□ -0.2
SPB4P25808 PTP1YDL230W 1008 nt13.8□□□□□ -0.2
SPB4P25808 SPP1YPL138C 1062 nt13.79□□□□□ -0.2
SPB4P25808 IDH1YNL037C 1083 nt13.77□□□□□ -0.21
SPB4P25808 ART5YGR068C 1761 nt13.76□□□□□ -0.21
SPB4P25808 CLB6YGR109C 1143 nt13.75□□□□□ -0.21
SPB4P25808 YDR433WYDR433W 441 nt13.74□□□□□ -0.21
SPB4P25808 ERV46YAL042W 1248 nt13.74□□□□□ -0.21
SPB4P25808 YBR220CYBR220C 1683 nt13.72□□□□□ -0.21
SPB4P25808 ADO1YJR105W 1023 nt13.69□□□□□ -0.22
SPB4P25808 GFD2YCL036W 1701 nt13.67□□□□□ -0.22
SPB4P25808 CAC2YML102W 1407 nt13.67□□□□□ -0.22
SPB4P25808 YEL076C-AYEL076C-A 651 nt13.67□□□□□ -0.22
SPB4P25808 YEL076CYEL076C 651 nt13.67□□□□□ -0.22
SPB4P25808 YLR464WYLR464W 651 nt13.67□□□□□ -0.22
SPB4P25808 YMR057CYMR057C 372 nt13.67□□□□□ -0.22
SPB4P25808 YKR040CYKR040C 504 nt13.63□□□□□ -0.23
SPB4P25808 GBP2YCL011C 1284 nt13.63□□□□□ -0.23
SPB4P25808 EMI2YDR516C 1503 nt13.62□□□□□ -0.23
SPB4P25808 PET9YBL030C 957 nt13.61□□□□□ -0.23
SPB4P25808 UBX6YJL048C 1191 nt13.6□□□□□ -0.23
SPB4P25808 RTG1YOL067C 534 nt13.6□□□□□ -0.23
SPB4P25808 MXR2YCL033C 507 nt13.59□□□□□ -0.23
SPB4P25808 NVJ2YPR091C 2313 nt13.55□□□□□ -0.24
SPB4P25808 RTS2YOR077W 699 nt13.55□□□□□ -0.24
SPB4P25808 YCL048W-AYCL048W-A 240 nt13.51□□□□□ -0.25
SPB4P25808 YMR090WYMR090W 684 nt13.5□□□□□ -0.25
SPB4P25808 SDH1YKL148C 1923 nt13.49□□□□□ -0.25
SPB4P25808 REG2YBR050C 1017 nt13.49□□□□□ -0.25
SPB4P25808 YDL221WYDL221W 552 nt13.47□□□□□ -0.25
SPB4P25808 IRC15YPL017C 1500 nt13.45□□□□□ -0.26
SPB4P25808 FPS1YLL043W 2010 nt13.44□□□□□ -0.26
SPB4P25808 PCH2YBR186W 1695 nt13.4□□□□□ -0.26
SPB4P25808 GUT2YIL155C 1950 nt13.4□□□□□ -0.26
SPB4P25808 YEL009C-AYEL009C-A 408 nt13.39□□□□□ -0.27
SPB4P25808 TCD2YKL027W 1344 nt13.39□□□□□ -0.27
SPB4P25808 DED1YOR204W 1815 nt13.38□□□□□ -0.27
SPB4P25808 HUA1YGR268C 597 nt13.37□□□□□ -0.27
SPB4P25808 RRD1YIL153W 1182 nt13.37□□□□□ -0.27
SPB4P25808 GIS3YLR094C 1509 nt13.34□□□□□ -0.27
SPB4P25808 SEC11YIR022W 504 nt13.3□□□□□ -0.28
SPB4P25808 CUE1YMR264W 612 nt13.3□□□□□ -0.28
SPB4P25808 PIB2YGL023C 1908 nt13.29□□□□□ -0.28
SPB4P25808 FRD1YEL047C 1413 nt13.28□□□□□ -0.28
SPB4P25808 FMT1YBL013W 1206 nt13.27□□□□□ -0.29
SPB4P25808 SCC4YER147C 1875 nt13.25□□□□□ -0.29
SPB4P25808 YDR094WYDR094W 336 nt13.24□□□□□ -0.29
SPB4P25808 PTH1YHR189W 573 nt13.22□□□□□ -0.29
SPB4P25808 YCL042WYCL042W 360 nt13.15□□□□□ -0.3
SPB4P25808 PAM17YKR065C 594 nt13.14□□□□□ -0.31
SPB4P25808 YJR154WYJR154W 1041 nt13.13□□□□□ -0.31
SPB4P25808 YKL030WYKL030W 606 nt13.12□□□□□ -0.31
SPB4P25808 SOR2YDL246C 1074 nt13.11□□□□□ -0.31
SPB4P25808 YIL100WYIL100W 354 nt13.11□□□□□ -0.31
SPB4P25808 SOR1YJR159W 1074 nt13.11□□□□□ -0.31
SPB4P25808 YFL015W-AYFL015W-A 318 nt13.09□□□□□ -0.31
SPB4P25808 Q0010Q0010 387 nt13.09□□□□□ -0.31
SPB4P25808 YLR122CYLR122C 378 nt13.08□□□□□ -0.32
SPB4P25808 YLR235CYLR235C 399 nt13.08□□□□□ -0.32
SPB4P25808 ARA2YMR041C 1008 nt13.07□□□□□ -0.32
SPB4P25808 CWP1YKL096W 720 nt13.06□□□□□ -0.32
SPB4P25808 ADH2YMR303C 1047 nt13.05□□□□□ -0.32
SPB4P25808 LCB1YMR296C 1677 nt13.04□□□□□ -0.32
SPB4P25808 YSC84YHR016C 1407 nt13.04□□□□□ -0.32
SPB4P25808 LCP5YER127W 1074 nt13.03□□□□□ -0.32
SPB4P25808 YHL050CYHL050C 2094 nt13.03□□□□□ -0.32
SPB4P25808 FMP52YER004W 696 nt13□□□□□ -0.33
SPB4P25808 RTF1YGL244W 1677 nt12.99□□□□□ -0.33
SPB4P25808 PCM1YEL058W 1674 nt12.92□□□□□ -0.34
SPB4P25808 URH1YDR400W 1023 nt12.91□□□□□ -0.34
SPB4P25808 RRT12YCR045C 1476 nt12.91□□□□□ -0.34
SPB4P25808 PTK1YKL198C 1989 nt12.89□□□□□ -0.35
SPB4P25808 YJL225CYJL225C 5277 nt12.89□□□□□ -0.35
SPB4P25808 SNF6YHL025W 999 nt12.86□□□□□ -0.35
Retrieved 100 of 7,029 protein–RNA pairs in 7.3 ms