Protein–RNA interactions for Protein: P25694

CDC48, Cell division control protein 48, yeastyeast

Known RBP Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC48P25694 DSK2YMR276W 1122 nt13.5□□□□□ -0.25
CDC48P25694 SIS1YNL007C 1059 nt13.5□□□□□ -0.25
CDC48P25694 SSA4YER103W 1929 nt13.5□□□□□ -0.25
CDC48P25694 IMP2'YIL154C 1041 nt13.49□□□□□ -0.25
CDC48P25694 MOT3YMR070W 1473 nt13.48□□□□□ -0.25
CDC48P25694 YHR165W-AYHR165W-A 312 nt13.45□□□□□ -0.26
CDC48P25694 YLR236CYLR236C 324 nt13.45□□□□□ -0.26
CDC48P25694 FMP45YDL222C 930 nt13.39□□□□□ -0.27
CDC48P25694 MEP2YNL142W 1500 nt13.36□□□□□ -0.27
CDC48P25694 RPP2AYOL039W 321 nt13.35□□□□□ -0.27
CDC48P25694 YCH1YGR203W 447 nt13.34□□□□□ -0.27
CDC48P25694 YJL152WYJL152W 360 nt13.34□□□□□ -0.27
CDC48P25694 PTP1YDL230W 1008 nt13.32□□□□□ -0.28
CDC48P25694 TIR4YOR009W 1464 nt13.31□□□□□ -0.28
CDC48P25694 IDH1YNL037C 1083 nt13.24□□□□□ -0.29
CDC48P25694 ERV46YAL042W 1248 nt13.23□□□□□ -0.29
CDC48P25694 ART5YGR068C 1761 nt13.22□□□□□ -0.29
CDC48P25694 PET9YBL030C 957 nt13.21□□□□□ -0.29
CDC48P25694 LPX1YOR084W 1164 nt13.19□□□□□ -0.3
CDC48P25694 Q0182Q0182 405 nt13.18□□□□□ -0.3
CDC48P25694 GFD2YCL036W 1701 nt13.16□□□□□ -0.3
CDC48P25694 CAC2YML102W 1407 nt13.14□□□□□ -0.31
CDC48P25694 DCW1YKL046C 1350 nt13.14□□□□□ -0.31
CDC48P25694 BDF1YLR399C 2061 nt13.12□□□□□ -0.31
CDC48P25694 YMR057CYMR057C 372 nt13.11□□□□□ -0.31
CDC48P25694 GBP2YCL011C 1284 nt13.1□□□□□ -0.31
CDC48P25694 YDR433WYDR433W 441 nt13.09□□□□□ -0.31
CDC48P25694 MRPL8YJL063C 717 nt13.08□□□□□ -0.32
CDC48P25694 YKR040CYKR040C 504 nt13.08□□□□□ -0.32
CDC48P25694 PAC11YDR488C 1602 nt13.08□□□□□ -0.32
CDC48P25694 SPP1YPL138C 1062 nt13.02□□□□□ -0.33
CDC48P25694 YCL048W-AYCL048W-A 240 nt13.02□□□□□ -0.33
CDC48P25694 EMI2YDR516C 1503 nt13□□□□□ -0.33
CDC48P25694 MXR2YCL033C 507 nt12.98□□□□□ -0.33
CDC48P25694 FPS1YLL043W 2010 nt12.96□□□□□ -0.33
CDC48P25694 IRC15YPL017C 1500 nt12.95□□□□□ -0.34
CDC48P25694 YDL221WYDL221W 552 nt12.94□□□□□ -0.34
CDC48P25694 TCD2YKL027W 1344 nt12.92□□□□□ -0.34
CDC48P25694 RTG1YOL067C 534 nt12.92□□□□□ -0.34
CDC48P25694 NVJ2YPR091C 2313 nt12.92□□□□□ -0.34
CDC48P25694 RTS2YOR077W 699 nt12.9□□□□□ -0.34
CDC48P25694 TAT1YBR069C 1860 nt12.9□□□□□ -0.34
CDC48P25694 YEL076C-AYEL076C-A 651 nt12.89□□□□□ -0.35
CDC48P25694 YEL076CYEL076C 651 nt12.89□□□□□ -0.35
CDC48P25694 RRD1YIL153W 1182 nt12.89□□□□□ -0.35
CDC48P25694 YLR464WYLR464W 651 nt12.89□□□□□ -0.35
CDC48P25694 DED1YOR204W 1815 nt12.89□□□□□ -0.35
CDC48P25694 ADO1YJR105W 1023 nt12.87□□□□□ -0.35
CDC48P25694 YMR090WYMR090W 684 nt12.86□□□□□ -0.35
CDC48P25694 CUE1YMR264W 612 nt12.86□□□□□ -0.35
CDC48P25694 GIS3YLR094C 1509 nt12.83□□□□□ -0.35
CDC48P25694 FRD1YEL047C 1413 nt12.8□□□□□ -0.36
CDC48P25694 FMT1YBL013W 1206 nt12.75□□□□□ -0.37
CDC48P25694 SDH1YKL148C 1923 nt12.73□□□□□ -0.37
CDC48P25694 SOR2YDL246C 1074 nt12.72□□□□□ -0.37
CDC48P25694 SOR1YJR159W 1074 nt12.72□□□□□ -0.37
CDC48P25694 YBR220CYBR220C 1683 nt12.69□□□□□ -0.38
CDC48P25694 SCC4YER147C 1875 nt12.69□□□□□ -0.38
CDC48P25694 FMP52YER004W 696 nt12.67□□□□□ -0.38
CDC48P25694 YCL042WYCL042W 360 nt12.65□□□□□ -0.38
CDC48P25694 YIL100WYIL100W 354 nt12.64□□□□□ -0.39
CDC48P25694 HUA1YGR268C 597 nt12.63□□□□□ -0.39
CDC48P25694 UBX6YJL048C 1191 nt12.58□□□□□ -0.4
CDC48P25694 YLR235CYLR235C 399 nt12.57□□□□□ -0.4
CDC48P25694 PTH1YHR189W 573 nt12.56□□□□□ -0.4
CDC48P25694 YKL030WYKL030W 606 nt12.55□□□□□ -0.4
CDC48P25694 CWP1YKL096W 720 nt12.53□□□□□ -0.4
CDC48P25694 ADH2YMR303C 1047 nt12.52□□□□□ -0.41
CDC48P25694 LCB1YMR296C 1677 nt12.47□□□□□ -0.41
CDC48P25694 PCM1YEL058W 1674 nt12.46□□□□□ -0.41
CDC48P25694 YDR094WYDR094W 336 nt12.46□□□□□ -0.41
CDC48P25694 SNF6YHL025W 999 nt12.4□□□□□ -0.42
CDC48P25694 DIC1YLR348C 897 nt12.38□□□□□ -0.43
CDC48P25694 YNL195CYNL195C 786 nt12.38□□□□□ -0.43
CDC48P25694 RRT12YCR045C 1476 nt12.35□□□□□ -0.43
CDC48P25694 YIH1YCR059C 777 nt12.35□□□□□ -0.43
CDC48P25694 TIM23YNR017W 669 nt12.35□□□□□ -0.43
CDC48P25694 RNQ1YCL028W 1218 nt12.35□□□□□ -0.43
CDC48P25694 YSC84YHR016C 1407 nt12.31□□□□□ -0.44
CDC48P25694 YHL050CYHL050C 2094 nt12.31□□□□□ -0.44
CDC48P25694 tL(GAG)GtL(GAG)G 82 nt12.25□□□□□ -0.45
CDC48P25694 YLR179CYLR179C 606 nt12.25□□□□□ -0.45
CDC48P25694 YFL015W-AYFL015W-A 318 nt12.24□□□□□ -0.45
CDC48P25694 WSC2YNL283C 1512 nt12.21□□□□□ -0.45
CDC48P25694 AHT1YHR093W 549 nt12.21□□□□□ -0.45
CDC48P25694 YPR064WYPR064W 420 nt12.21□□□□□ -0.45
CDC48P25694 BIO4YNR057C 714 nt12.2□□□□□ -0.46
CDC48P25694 SEC11YIR022W 504 nt12.19□□□□□ -0.46
CDC48P25694 YLL053CYLL053C 459 nt12.19□□□□□ -0.46
CDC48P25694 YFR018CYFR018C 1092 nt12.18□□□□□ -0.46
CDC48P25694 TAD3YLR316C 969 nt12.17□□□□□ -0.46
CDC48P25694 SIM1YIL123W 1431 nt12.16□□□□□ -0.46
CDC48P25694 FTR1YER145C 1215 nt12.14□□□□□ -0.47
CDC48P25694 AQY1YPR192W 918 nt12.13□□□□□ -0.47
CDC48P25694 PCH2YBR186W 1695 nt12.13□□□□□ -0.47
CDC48P25694 GUT2YIL155C 1950 nt12.11□□□□□ -0.47
CDC48P25694 GAL1YBR020W 1587 nt12.09□□□□□ -0.47
CDC48P25694 PAU16YKL224C 372 nt12.06□□□□□ -0.48
CDC48P25694 PRE6YOL038W 765 nt12.05□□□□□ -0.48
CDC48P25694 TRM5YHR070W 1500 nt12.04□□□□□ -0.48
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms