Protein–RNA interactions for Protein: P25339

PUF4, Pumilio homology domain family member 4, yeastyeast

Known RBP RIP-Chip data

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF4P25339 SUF10tP(AGG)N 72 nt12.9□□□□□ -0.34
PUF4P25339 YBR220CYBR220C 1683 nt12.87□□□□□ -0.35
PUF4P25339 NPL3YDR432W 1245 nt12.84□□□□□ -0.35
PUF4P25339 YMR090WYMR090W 684 nt12.83□□□□□ -0.36
PUF4P25339 IRC15YPL017C 1500 nt12.82□□□□□ -0.36
PUF4P25339 ART5YGR068C 1761 nt12.81□□□□□ -0.36
PUF4P25339 GFD2YCL036W 1701 nt12.79□□□□□ -0.36
PUF4P25339 SDH1YKL148C 1923 nt12.78□□□□□ -0.36
PUF4P25339 TAT1YBR069C 1860 nt12.76□□□□□ -0.37
PUF4P25339 TIR4YOR009W 1464 nt12.73□□□□□ -0.37
PUF4P25339 RTS2YOR077W 699 nt12.71□□□□□ -0.37
PUF4P25339 GIS3YLR094C 1509 nt12.71□□□□□ -0.38
PUF4P25339 SCC4YER147C 1875 nt12.68□□□□□ -0.38
PUF4P25339 PET9YBL030C 957 nt12.66□□□□□ -0.38
PUF4P25339 YOL037CYOL037C 354 nt12.65□□□□□ -0.38
PUF4P25339 FPS1YLL043W 2010 nt12.62□□□□□ -0.39
PUF4P25339 YMR057CYMR057C 372 nt12.59□□□□□ -0.39
PUF4P25339 YCH1YGR203W 447 nt12.56□□□□□ -0.4
PUF4P25339 YLR154C-GYLR154C-G 150 nt12.56□□□□□ -0.4
PUF4P25339 NVJ2YPR091C 2313 nt12.55□□□□□ -0.4
PUF4P25339 PAC11YDR488C 1602 nt12.52□□□□□ -0.4
PUF4P25339 CUE1YMR264W 612 nt12.52□□□□□ -0.41
PUF4P25339 YJL152WYJL152W 360 nt12.51□□□□□ -0.41
PUF4P25339 WHI5YOR083W 888 nt12.44□□□□□ -0.42 RIP-Chip
PUF4P25339 YLR281CYLR281C 468 nt12.43□□□□□ -0.42
PUF4P25339 YSC84YHR016C 1407 nt12.42□□□□□ -0.42
PUF4P25339 tM(CAU)CtM(CAU)C 72 nt12.4□□□□□ -0.42
PUF4P25339 IMT4tM(CAU)E 72 nt12.4□□□□□ -0.42
PUF4P25339 IMT3tM(CAU)J3 72 nt12.4□□□□□ -0.42
PUF4P25339 IMT1tM(CAU)O1 72 nt12.4□□□□□ -0.42
PUF4P25339 IMT2tM(CAU)P 72 nt12.4□□□□□ -0.42
PUF4P25339 PCH2YBR186W 1695 nt12.38□□□□□ -0.43
PUF4P25339 YHL050CYHL050C 2094 nt12.38□□□□□ -0.43
PUF4P25339 RRT12YCR045C 1476 nt12.37□□□□□ -0.43
PUF4P25339 GUT2YIL155C 1950 nt12.34□□□□□ -0.43
PUF4P25339 SEC11YIR022W 504 nt12.34□□□□□ -0.43
PUF4P25339 YIL100WYIL100W 354 nt12.32□□□□□ -0.44
PUF4P25339 YCL048W-AYCL048W-A 240 nt12.32□□□□□ -0.44
PUF4P25339 YLR236CYLR236C 324 nt12.29□□□□□ -0.44
PUF4P25339 PUS2YGL063W 1113 nt12.23□□□□□ -0.45
PUF4P25339 PIB2YGL023C 1908 nt12.22□□□□□ -0.45
PUF4P25339 YNL195CYNL195C 786 nt12.2□□□□□ -0.46
PUF4P25339 YPR011CYPR011C 981 nt12.2□□□□□ -0.46
PUF4P25339 RRD1YIL153W 1182 nt12.18□□□□□ -0.46
PUF4P25339 IDH1YNL037C 1083 nt12.18□□□□□ -0.46
PUF4P25339 GBP2YCL011C 1284 nt12.16□□□□□ -0.46
PUF4P25339 DSK2YMR276W 1122 nt12.13□□□□□ -0.47
PUF4P25339 DED1YOR204W 1815 nt12.12□□□□□ -0.47
PUF4P25339 RTF1YGL244W 1677 nt12.09□□□□□ -0.47
PUF4P25339 IMP2'YIL154C 1041 nt12.05□□□□□ -0.48
PUF4P25339 FMT1YBL013W 1206 nt12.05□□□□□ -0.48
PUF4P25339 MXR2YCL033C 507 nt12.04□□□□□ -0.48
PUF4P25339 MRPL8YJL063C 717 nt12.03□□□□□ -0.48
PUF4P25339 TCD2YKL027W 1344 nt12.03□□□□□ -0.48
PUF4P25339 FMP45YDL222C 930 nt12.02□□□□□ -0.49
PUF4P25339 YDR433WYDR433W 441 nt12.02□□□□□ -0.49
PUF4P25339 NCP1YHR042W 2076 nt12.02□□□□□ -0.49
PUF4P25339 BOP3YNL042W 1191 nt12□□□□□ -0.49
PUF4P25339 LPX1YOR084W 1164 nt11.99□□□□□ -0.49 RIP-Chip
PUF4P25339 LCB1YMR296C 1677 nt11.97□□□□□ -0.49
PUF4P25339 PTK1YKL198C 1989 nt11.96□□□□□ -0.5
PUF4P25339 FMP52YER004W 696 nt11.94□□□□□ -0.5
PUF4P25339 ERV46YAL042W 1248 nt11.93□□□□□ -0.5
PUF4P25339 PCM1YEL058W 1674 nt11.93□□□□□ -0.5
PUF4P25339 ADH2YMR303C 1047 nt11.92□□□□□ -0.5
PUF4P25339 CWP1YKL096W 720 nt11.9□□□□□ -0.5
PUF4P25339 YKR040CYKR040C 504 nt11.85□□□□□ -0.51
PUF4P25339 SOR2YDL246C 1074 nt11.84□□□□□ -0.51
PUF4P25339 ADO1YJR105W 1023 nt11.84□□□□□ -0.51
PUF4P25339 SOR1YJR159W 1074 nt11.84□□□□□ -0.51
PUF4P25339 FRD1YEL047C 1413 nt11.83□□□□□ -0.52
PUF4P25339 SIM1YIL123W 1431 nt11.82□□□□□ -0.52
PUF4P25339 SNF6YHL025W 999 nt11.79□□□□□ -0.52
PUF4P25339 BIO4YNR057C 714 nt11.78□□□□□ -0.52
PUF4P25339 YCL042WYCL042W 360 nt11.76□□□□□ -0.53
PUF4P25339 UBX6YJL048C 1191 nt11.75□□□□□ -0.53
PUF4P25339 LYS4YDR234W 2082 nt11.72□□□□□ -0.53
PUF4P25339 SPP1YPL138C 1062 nt11.71□□□□□ -0.53
PUF4P25339 YFL054CYFL054C 1941 nt11.7□□□□□ -0.54
PUF4P25339 YIH1YCR059C 777 nt11.67□□□□□ -0.54
PUF4P25339 YEL076C-AYEL076C-A 651 nt11.65□□□□□ -0.54
PUF4P25339 YEL076CYEL076C 651 nt11.65□□□□□ -0.54
PUF4P25339 YLR464WYLR464W 651 nt11.65□□□□□ -0.54
PUF4P25339 YLL053CYLL053C 459 nt11.63□□□□□ -0.55
PUF4P25339 RNQ1YCL028W 1218 nt11.62□□□□□ -0.55
PUF4P25339 SPT8YLR055C 1809 nt11.6□□□□□ -0.55 RIP-Chip
PUF4P25339 DIC1YLR348C 897 nt11.58□□□□□ -0.56
PUF4P25339 PTH1YHR189W 573 nt11.57□□□□□ -0.56
PUF4P25339 CRR1YLR213C 1269 nt11.56□□□□□ -0.56
PUF4P25339 ATF2YGR177C 1608 nt11.54□□□□□ -0.56
PUF4P25339 ERF2YLR246W 1080 nt11.54□□□□□ -0.56
PUF4P25339 UME6YDR207C 2511 nt11.52□□□□□ -0.57
PUF4P25339 FTR1YER145C 1215 nt11.5□□□□□ -0.57
PUF4P25339 MIC10YCL057C-A 294 nt11.5□□□□□ -0.57
PUF4P25339 GAL1YBR020W 1587 nt11.48□□□□□ -0.57
PUF4P25339 TRM5YHR070W 1500 nt11.47□□□□□ -0.57
PUF4P25339 SWE1YJL187C 2460 nt11.46□□□□□ -0.58
PUF4P25339 SNG1YGR197C 1644 nt11.44□□□□□ -0.58
PUF4P25339 HEM12YDR047W 1089 nt11.42□□□□□ -0.58
PUF4P25339 YHR056W-AYHR056W-A 435 nt11.42□□□□□ -0.58
Retrieved 100 of 7,029 protein–RNA pairs in 14.2 ms