Protein–RNA interactions for Protein: P23394

PRP28, Pre-mRNA-splicing ATP-dependent RNA helicase PRP28, yeastyeast

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP28P23394 RKM5YLR137W 1104 nt11.34□□□□□ -0.59
PRP28P23394 SIS1YNL007C 1059 nt11.33□□□□□ -0.6
PRP28P23394 PTP1YDL230W 1008 nt11.32□□□□□ -0.6
PRP28P23394 YBR220CYBR220C 1683 nt11.29□□□□□ -0.6
PRP28P23394 YDL221WYDL221W 552 nt11.28□□□□□ -0.6
PRP28P23394 CAC2YML102W 1407 nt11.23□□□□□ -0.61
PRP28P23394 YOL037CYOL037C 354 nt11.21□□□□□ -0.61
PRP28P23394 SDH1YKL148C 1923 nt11.21□□□□□ -0.62
PRP28P23394 YJL225CYJL225C 5277 nt11.12□□□□□ -0.63
PRP28P23394 YCH1YGR203W 447 nt11.12□□□□□ -0.63
PRP28P23394 PET9YBL030C 957 nt11.11□□□□□ -0.63
PRP28P23394 GFD2YCL036W 1701 nt11.11□□□□□ -0.63
PRP28P23394 ART5YGR068C 1761 nt11.11□□□□□ -0.63
PRP28P23394 YOR139CYOR139C 393 nt11.1□□□□□ -0.63
PRP28P23394 SCC4YER147C 1875 nt11.09□□□□□ -0.63
PRP28P23394 NPL3YDR432W 1245 nt11.09□□□□□ -0.63
PRP28P23394 IRC15YPL017C 1500 nt11.09□□□□□ -0.63
PRP28P23394 TIR4YOR009W 1464 nt11.04□□□□□ -0.64
PRP28P23394 GIS3YLR094C 1509 nt11.02□□□□□ -0.65
PRP28P23394 SEC11YIR022W 504 nt11.01□□□□□ -0.65
PRP28P23394 YLR154C-GYLR154C-G 150 nt11□□□□□ -0.65
PRP28P23394 PCH2YBR186W 1695 nt10.99□□□□□ -0.65
PRP28P23394 GUT2YIL155C 1950 nt10.96□□□□□ -0.65
PRP28P23394 RTS2YOR077W 699 nt10.95□□□□□ -0.66
PRP28P23394 CUE1YMR264W 612 nt10.93□□□□□ -0.66
PRP28P23394 YJL152WYJL152W 360 nt10.91□□□□□ -0.66
PRP28P23394 YLR281CYLR281C 468 nt10.91□□□□□ -0.66
PRP28P23394 YMR057CYMR057C 372 nt10.91□□□□□ -0.66
PRP28P23394 WHI5YOR083W 888 nt10.89□□□□□ -0.67
PRP28P23394 RDN37-1RDN37-1 5354 nt10.86□□□□□ -0.67
PRP28P23394 RDN37-2RDN37-2 5354 nt10.86□□□□□ -0.67
PRP28P23394 YSC84YHR016C 1407 nt10.84□□□□□ -0.67
PRP28P23394 YNL195CYNL195C 786 nt10.82□□□□□ -0.68
PRP28P23394 PIB2YGL023C 1908 nt10.82□□□□□ -0.68
PRP28P23394 YIL100WYIL100W 354 nt10.81□□□□□ -0.68
PRP28P23394 YCL048W-AYCL048W-A 240 nt10.81□□□□□ -0.68
PRP28P23394 YLR236CYLR236C 324 nt10.8□□□□□ -0.68
PRP28P23394 RPM1RPM1 483 nt10.77□□□□□ -0.69
PRP28P23394 YHL050CYHL050C 2094 nt10.75□□□□□ -0.69
PRP28P23394 IMP2'YIL154C 1041 nt10.74□□□□□ -0.69
PRP28P23394 IDH1YNL037C 1083 nt10.73□□□□□ -0.69
PRP28P23394 RRT12YCR045C 1476 nt10.7□□□□□ -0.7
PRP28P23394 PUS2YGL063W 1113 nt10.7□□□□□ -0.7
PRP28P23394 tM(CAU)CtM(CAU)C 72 nt10.69□□□□□ -0.7
PRP28P23394 IMT4tM(CAU)E 72 nt10.69□□□□□ -0.7
PRP28P23394 IMT3tM(CAU)J3 72 nt10.69□□□□□ -0.7
PRP28P23394 IMT1tM(CAU)O1 72 nt10.69□□□□□ -0.7
PRP28P23394 IMT2tM(CAU)P 72 nt10.69□□□□□ -0.7
PRP28P23394 RTF1YGL244W 1677 nt10.67□□□□□ -0.7
PRP28P23394 DSK2YMR276W 1122 nt10.67□□□□□ -0.7
PRP28P23394 BOP3YNL042W 1191 nt10.64□□□□□ -0.71
PRP28P23394 UME6YDR207C 2511 nt10.64□□□□□ -0.71
PRP28P23394 GBP2YCL011C 1284 nt10.63□□□□□ -0.71
PRP28P23394 RRD1YIL153W 1182 nt10.57□□□□□ -0.72
PRP28P23394 TCD2YKL027W 1344 nt10.57□□□□□ -0.72
PRP28P23394 FMP52YER004W 696 nt10.56□□□□□ -0.72
PRP28P23394 PTK1YKL198C 1989 nt10.54□□□□□ -0.72
PRP28P23394 YPR011CYPR011C 981 nt10.51□□□□□ -0.73
PRP28P23394 DED1YOR204W 1815 nt10.49□□□□□ -0.73
PRP28P23394 YDR433WYDR433W 441 nt10.49□□□□□ -0.73
PRP28P23394 ERV46YAL042W 1248 nt10.49□□□□□ -0.73
PRP28P23394 FMP45YDL222C 930 nt10.47□□□□□ -0.73
PRP28P23394 NCP1YHR042W 2076 nt10.43□□□□□ -0.74
PRP28P23394 YKR040CYKR040C 504 nt10.41□□□□□ -0.74
PRP28P23394 BOR1YNL275W 1731 nt10.41□□□□□ -0.74
PRP28P23394 SOR2YDL246C 1074 nt10.4□□□□□ -0.74
PRP28P23394 SOR1YJR159W 1074 nt10.4□□□□□ -0.74
PRP28P23394 FMT1YBL013W 1206 nt10.4□□□□□ -0.74
PRP28P23394 LPX1YOR084W 1164 nt10.4□□□□□ -0.74
PRP28P23394 MXR2YCL033C 507 nt10.39□□□□□ -0.75
PRP28P23394 PCM1YEL058W 1674 nt10.38□□□□□ -0.75
PRP28P23394 YCL042WYCL042W 360 nt10.35□□□□□ -0.75
PRP28P23394 LCB1YMR296C 1677 nt10.34□□□□□ -0.75
PRP28P23394 CWP1YKL096W 720 nt10.33□□□□□ -0.76
PRP28P23394 SNF6YHL025W 999 nt10.32□□□□□ -0.76
PRP28P23394 ADH2YMR303C 1047 nt10.32□□□□□ -0.76
PRP28P23394 YFL054CYFL054C 1941 nt10.3□□□□□ -0.76
PRP28P23394 FRD1YEL047C 1413 nt10.29□□□□□ -0.76
PRP28P23394 SIM1YIL123W 1431 nt10.29□□□□□ -0.76
PRP28P23394 SPT8YLR055C 1809 nt10.26□□□□□ -0.77
PRP28P23394 BIO4YNR057C 714 nt10.24□□□□□ -0.77
PRP28P23394 FRE6YLL051C 2139 nt10.23□□□□□ -0.77
PRP28P23394 YIH1YCR059C 777 nt10.22□□□□□ -0.77
PRP28P23394 MCH5YOR306C 1566 nt10.19□□□□□ -0.78
PRP28P23394 RNQ1YCL028W 1218 nt10.19□□□□□ -0.78
PRP28P23394 ERF2YLR246W 1080 nt10.15□□□□□ -0.78
PRP28P23394 LYS4YDR234W 2082 nt10.13□□□□□ -0.79
PRP28P23394 YLL053CYLL053C 459 nt10.11□□□□□ -0.79
PRP28P23394 CRR1YLR213C 1269 nt10.11□□□□□ -0.79
PRP28P23394 DIC1YLR348C 897 nt10.11□□□□□ -0.79
PRP28P23394 YLR235CYLR235C 399 nt10.08□□□□□ -0.8
PRP28P23394 SPP1YPL138C 1062 nt10.08□□□□□ -0.8
PRP28P23394 ALG12YNR030W 1656 nt10.08□□□□□ -0.8
PRP28P23394 SWE1YJL187C 2460 nt10.06□□□□□ -0.8
PRP28P23394 FTR1YER145C 1215 nt10.05□□□□□ -0.8
PRP28P23394 YFL067WYFL067W 528 nt10.03□□□□□ -0.8
PRP28P23394 AQY1YPR192W 918 nt10.03□□□□□ -0.8
PRP28P23394 PTH1YHR189W 573 nt10.01□□□□□ -0.81
PRP28P23394 GAL1YBR020W 1587 nt10.01□□□□□ -0.81
PRP28P23394 ATF2YGR177C 1608 nt10□□□□□ -0.81
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms