Protein–RNA interactions for Protein: P16649

TUP1, General transcriptional corepressor TUP1, yeastyeast

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TUP1P16649 YBR220CYBR220C 1683 nt13.25□□□□□ -0.29
TUP1P16649 GFD2YCL036W 1701 nt13.25□□□□□ -0.29
TUP1P16649 IRC15YPL017C 1500 nt13.23□□□□□ -0.29
TUP1P16649 TIR4YOR009W 1464 nt13.21□□□□□ -0.3
TUP1P16649 YMR090WYMR090W 684 nt13.2□□□□□ -0.3
TUP1P16649 YOL037CYOL037C 354 nt13.2□□□□□ -0.3
TUP1P16649 NPL3YDR432W 1245 nt13.17□□□□□ -0.3
TUP1P16649 SDH1YKL148C 1923 nt13.17□□□□□ -0.3
TUP1P16649 RTS2YOR077W 699 nt13.16□□□□□ -0.3
TUP1P16649 GIS3YLR094C 1509 nt13.13□□□□□ -0.31
TUP1P16649 PET9YBL030C 957 nt13.11□□□□□ -0.31
TUP1P16649 YLR154C-GYLR154C-G 150 nt13.09□□□□□ -0.31
TUP1P16649 YMR057CYMR057C 372 nt13.08□□□□□ -0.32
TUP1P16649 SCC4YER147C 1875 nt13.06□□□□□ -0.32
TUP1P16649 YCH1YGR203W 447 nt13.06□□□□□ -0.32
TUP1P16649 TAT1YBR069C 1860 nt13.06□□□□□ -0.32
TUP1P16649 YJL152WYJL152W 360 nt13.04□□□□□ -0.32
TUP1P16649 PAC11YDR488C 1602 nt13.03□□□□□ -0.32
TUP1P16649 YLR281CYLR281C 468 nt13□□□□□ -0.33
TUP1P16649 WHI5YOR083W 888 nt13□□□□□ -0.33
TUP1P16649 CUE1YMR264W 612 nt12.94□□□□□ -0.34
TUP1P16649 FPS1YLL043W 2010 nt12.94□□□□□ -0.34
TUP1P16649 tM(CAU)CtM(CAU)C 72 nt12.83□□□□□ -0.36
TUP1P16649 IMT4tM(CAU)E 72 nt12.83□□□□□ -0.36
TUP1P16649 IMT3tM(CAU)J3 72 nt12.83□□□□□ -0.36
TUP1P16649 IMT1tM(CAU)O1 72 nt12.83□□□□□ -0.36
TUP1P16649 IMT2tM(CAU)P 72 nt12.83□□□□□ -0.36
TUP1P16649 PUS2YGL063W 1113 nt12.82□□□□□ -0.36
TUP1P16649 YSC84YHR016C 1407 nt12.8□□□□□ -0.36
TUP1P16649 YCL048W-AYCL048W-A 240 nt12.8□□□□□ -0.36
TUP1P16649 RRT12YCR045C 1476 nt12.79□□□□□ -0.36
TUP1P16649 YPR011CYPR011C 981 nt12.78□□□□□ -0.36
TUP1P16649 YHL050CYHL050C 2094 nt12.77□□□□□ -0.37
TUP1P16649 YLR236CYLR236C 324 nt12.75□□□□□ -0.37
TUP1P16649 YIL100WYIL100W 354 nt12.73□□□□□ -0.37
TUP1P16649 PCH2YBR186W 1695 nt12.72□□□□□ -0.37
TUP1P16649 NVJ2YPR091C 2313 nt12.7□□□□□ -0.38
TUP1P16649 IDH1YNL037C 1083 nt12.68□□□□□ -0.38
TUP1P16649 GUT2YIL155C 1950 nt12.67□□□□□ -0.38
TUP1P16649 DSK2YMR276W 1122 nt12.67□□□□□ -0.38
TUP1P16649 GBP2YCL011C 1284 nt12.67□□□□□ -0.38
TUP1P16649 SEC11YIR022W 504 nt12.66□□□□□ -0.38
TUP1P16649 RRD1YIL153W 1182 nt12.64□□□□□ -0.39
TUP1P16649 DED1YOR204W 1815 nt12.61□□□□□ -0.39
TUP1P16649 YNL195CYNL195C 786 nt12.59□□□□□ -0.39
TUP1P16649 MXR2YCL033C 507 nt12.58□□□□□ -0.4
TUP1P16649 IMP2'YIL154C 1041 nt12.56□□□□□ -0.4
TUP1P16649 PIB2YGL023C 1908 nt12.56□□□□□ -0.4
TUP1P16649 FMP45YDL222C 930 nt12.55□□□□□ -0.4
TUP1P16649 YDR433WYDR433W 441 nt12.54□□□□□ -0.4
TUP1P16649 LPX1YOR084W 1164 nt12.54□□□□□ -0.4
TUP1P16649 FMT1YBL013W 1206 nt12.53□□□□□ -0.4
TUP1P16649 TCD2YKL027W 1344 nt12.51□□□□□ -0.41
TUP1P16649 ERV46YAL042W 1248 nt12.45□□□□□ -0.42
TUP1P16649 RTF1YGL244W 1677 nt12.42□□□□□ -0.42
TUP1P16649 NCP1YHR042W 2076 nt12.39□□□□□ -0.43
TUP1P16649 ADH2YMR303C 1047 nt12.38□□□□□ -0.43
TUP1P16649 LCB1YMR296C 1677 nt12.38□□□□□ -0.43
TUP1P16649 FMP52YER004W 696 nt12.37□□□□□ -0.43
TUP1P16649 YKR040CYKR040C 504 nt12.37□□□□□ -0.43
TUP1P16649 PCM1YEL058W 1674 nt12.37□□□□□ -0.43
TUP1P16649 CWP1YKL096W 720 nt12.36□□□□□ -0.43
TUP1P16649 BOP3YNL042W 1191 nt12.33□□□□□ -0.44
TUP1P16649 FRD1YEL047C 1413 nt12.32□□□□□ -0.44
TUP1P16649 PTK1YKL198C 1989 nt12.3□□□□□ -0.44
TUP1P16649 SOR2YDL246C 1074 nt12.29□□□□□ -0.44
TUP1P16649 SOR1YJR159W 1074 nt12.29□□□□□ -0.44
TUP1P16649 SPP1YPL138C 1062 nt12.29□□□□□ -0.44
TUP1P16649 Q0182Q0182 405 nt12.27□□□□□ -0.45
TUP1P16649 YCL042WYCL042W 360 nt12.25□□□□□ -0.45
TUP1P16649 SIM1YIL123W 1431 nt12.23□□□□□ -0.45
TUP1P16649 SNF6YHL025W 999 nt12.23□□□□□ -0.45
TUP1P16649 MOT3YMR070W 1473 nt12.21□□□□□ -0.46
TUP1P16649 BIO4YNR057C 714 nt12.2□□□□□ -0.46
TUP1P16649 LYS4YDR234W 2082 nt12.11□□□□□ -0.47
TUP1P16649 YIH1YCR059C 777 nt12.1□□□□□ -0.47
TUP1P16649 PTH1YHR189W 573 nt12.09□□□□□ -0.47
TUP1P16649 YLL053CYLL053C 459 nt12.07□□□□□ -0.48
TUP1P16649 RNQ1YCL028W 1218 nt12.06□□□□□ -0.48
TUP1P16649 YFL054CYFL054C 1941 nt12.05□□□□□ -0.48
TUP1P16649 DIC1YLR348C 897 nt12.04□□□□□ -0.48
TUP1P16649 ATF2YGR177C 1608 nt11.97□□□□□ -0.49
TUP1P16649 CRR1YLR213C 1269 nt11.95□□□□□ -0.5
TUP1P16649 FTR1YER145C 1215 nt11.93□□□□□ -0.5
TUP1P16649 ERF2YLR246W 1080 nt11.93□□□□□ -0.5
TUP1P16649 SPT8YLR055C 1809 nt11.93□□□□□ -0.5
TUP1P16649 MIC10YCL057C-A 294 nt11.92□□□□□ -0.5
TUP1P16649 GAL1YBR020W 1587 nt11.92□□□□□ -0.5
TUP1P16649 TRM5YHR070W 1500 nt11.91□□□□□ -0.5
TUP1P16649 YLR235CYLR235C 399 nt11.89□□□□□ -0.51
TUP1P16649 TIM23YNR017W 669 nt11.87□□□□□ -0.51
TUP1P16649 RTG1YOL067C 534 nt11.87□□□□□ -0.51
TUP1P16649 SNG1YGR197C 1644 nt11.84□□□□□ -0.51
TUP1P16649 YLR179CYLR179C 606 nt11.83□□□□□ -0.52
TUP1P16649 HEM12YDR047W 1089 nt11.82□□□□□ -0.52
TUP1P16649 YKL030WYKL030W 606 nt11.82□□□□□ -0.52
TUP1P16649 UME6YDR207C 2511 nt11.8□□□□□ -0.52
TUP1P16649 YFL067WYFL067W 528 nt11.79□□□□□ -0.52
TUP1P16649 DDR2YOL052C-A 186 nt11.79□□□□□ -0.52
TUP1P16649 SWE1YJL187C 2460 nt11.78□□□□□ -0.52
Retrieved 100 of 7,029 protein–RNA pairs in 16.5 ms