Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.75■■□□□ 1.23
Fn1P11276 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.74■■□□□ 1.23
Fn1P11276 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Fn1P11276 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.73■■□□□ 1.23
Fn1P11276 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Fn1P11276 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Fn1P11276 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.67■■□□□ 1.22
Fn1P11276 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Fn1P11276 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Fn1P11276 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Fn1P11276 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.53■■□□□ 1.2
Fn1P11276 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
Fn1P11276 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Fn1P11276 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Fn1P11276 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.48■■□□□ 1.19
Fn1P11276 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.48■■□□□ 1.19
Fn1P11276 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.48■■□□□ 1.19
Fn1P11276 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Fn1P11276 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Fn1P11276 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22.42■■□□□ 1.18
Fn1P11276 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Fn1P11276 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Fn1P11276 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Fn1P11276 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Fn1P11276 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.37■■□□□ 1.17
Fn1P11276 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.36■■□□□ 1.17
Fn1P11276 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.34■■□□□ 1.17
Fn1P11276 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Fn1P11276 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Fn1P11276 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Fn1P11276 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Fn1P11276 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.29■■□□□ 1.16
Fn1P11276 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Fn1P11276 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.26■■□□□ 1.15
Fn1P11276 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Fn1P11276 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Fn1P11276 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.25■■□□□ 1.15
Fn1P11276 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Fn1P11276 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Fn1P11276 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.14■■□□□ 1.13
Fn1P11276 Gm16148-201ENSMUST00000119653 893 ntBASIC22.13■■□□□ 1.13
Fn1P11276 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Fn1P11276 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Fn1P11276 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Fn1P11276 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Fn1P11276 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Fn1P11276 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
Fn1P11276 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Fn1P11276 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Fn1P11276 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Fn1P11276 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Fn1P11276 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Fn1P11276 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
Fn1P11276 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Fn1P11276 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Fn1P11276 Gm45855-201ENSMUST00000212546 880 ntBASIC21.98■■□□□ 1.11
Fn1P11276 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Fn1P11276 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Fn1P11276 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Fn1P11276 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Fn1P11276 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Fn1P11276 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Fn1P11276 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Fn1P11276 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Fn1P11276 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Fn1P11276 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Fn1P11276 Psd-208ENSMUST00000224556 2034 ntBASIC21.88■■□□□ 1.09
Fn1P11276 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.86■■□□□ 1.09
Fn1P11276 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Fn1P11276 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.85■■□□□ 1.09
Fn1P11276 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Fn1P11276 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Fn1P11276 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Fn1P11276 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.84■■□□□ 1.09
Fn1P11276 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Fn1P11276 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Fn1P11276 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Fn1P11276 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Fn1P11276 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.77■■□□□ 1.07
Fn1P11276 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Fn1P11276 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Fn1P11276 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Fn1P11276 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Fn1P11276 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Fn1P11276 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Fn1P11276 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Fn1P11276 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Fn1P11276 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.68■■□□□ 1.06
Fn1P11276 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Fn1P11276 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Fn1P11276 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.67■■□□□ 1.06
Fn1P11276 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Fn1P11276 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Fn1P11276 Gm9397-201ENSMUST00000200125 605 ntBASIC21.65■■□□□ 1.06
Fn1P11276 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
Fn1P11276 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Fn1P11276 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Fn1P11276 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.63■■□□□ 1.05
Fn1P11276 Peli2-204ENSMUST00000226513 1320 ntBASIC21.62■■□□□ 1.05
Fn1P11276 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms