Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.75■■□□□ 1.23
Fn1P11276 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.74■■□□□ 1.23
Fn1P11276 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Fn1P11276 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.73■■□□□ 1.23
Fn1P11276 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Fn1P11276 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Fn1P11276 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.67■■□□□ 1.22
Fn1P11276 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Fn1P11276 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Fn1P11276 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Fn1P11276 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.53■■□□□ 1.2
Fn1P11276 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
Fn1P11276 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Fn1P11276 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Fn1P11276 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.48■■□□□ 1.19
Fn1P11276 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.48■■□□□ 1.19
Fn1P11276 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.48■■□□□ 1.19
Fn1P11276 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Fn1P11276 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Fn1P11276 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22.42■■□□□ 1.18
Fn1P11276 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Fn1P11276 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Fn1P11276 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Fn1P11276 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Fn1P11276 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.37■■□□□ 1.17
Fn1P11276 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.36■■□□□ 1.17
Fn1P11276 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.34■■□□□ 1.17
Fn1P11276 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Fn1P11276 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Fn1P11276 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Fn1P11276 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Fn1P11276 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.29■■□□□ 1.16
Fn1P11276 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Fn1P11276 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.26■■□□□ 1.15
Fn1P11276 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Fn1P11276 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Fn1P11276 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.25■■□□□ 1.15
Fn1P11276 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Fn1P11276 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Fn1P11276 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.14■■□□□ 1.13
Fn1P11276 Gm16148-201ENSMUST00000119653 893 ntBASIC22.13■■□□□ 1.13
Fn1P11276 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Fn1P11276 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Fn1P11276 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Fn1P11276 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Fn1P11276 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Fn1P11276 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
Fn1P11276 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Fn1P11276 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Fn1P11276 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Fn1P11276 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Fn1P11276 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Fn1P11276 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
Fn1P11276 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Fn1P11276 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Fn1P11276 Gm45855-201ENSMUST00000212546 880 ntBASIC21.98■■□□□ 1.11
Fn1P11276 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Fn1P11276 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Fn1P11276 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Fn1P11276 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Fn1P11276 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Fn1P11276 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Fn1P11276 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Fn1P11276 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Fn1P11276 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Fn1P11276 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Fn1P11276 Psd-208ENSMUST00000224556 2034 ntBASIC21.88■■□□□ 1.09
Fn1P11276 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.86■■□□□ 1.09
Fn1P11276 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Fn1P11276 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.85■■□□□ 1.09
Fn1P11276 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Fn1P11276 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Fn1P11276 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Fn1P11276 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.84■■□□□ 1.09
Fn1P11276 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Fn1P11276 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Fn1P11276 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Fn1P11276 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Fn1P11276 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.77■■□□□ 1.07
Fn1P11276 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Fn1P11276 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Fn1P11276 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Fn1P11276 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Fn1P11276 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Fn1P11276 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Fn1P11276 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Fn1P11276 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Fn1P11276 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.68■■□□□ 1.06
Fn1P11276 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Fn1P11276 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Fn1P11276 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.67■■□□□ 1.06
Fn1P11276 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Fn1P11276 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Fn1P11276 Gm9397-201ENSMUST00000200125 605 ntBASIC21.65■■□□□ 1.06
Fn1P11276 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
Fn1P11276 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Fn1P11276 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Fn1P11276 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.63■■□□□ 1.05
Fn1P11276 Peli2-204ENSMUST00000226513 1320 ntBASIC21.62■■□□□ 1.05
Fn1P11276 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms