Protein–RNA interactions for Protein: P10155

TROVE2, 60 kDa SS-A/Ro ribonucleoprotein, humanhuman

Known RBP eCLIP

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TROVE2P10155 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.571e-71■■■■■ 146.3
TROVE2P10155 KCNK4-203ENST00000453423 971 ntTSL 218.38■□□□□ 0.531e-71■■■■■ 146.3
TROVE2P10155 KCNK4-206ENST00000538846 814 ntTSL 1 (best)18.38■□□□□ 0.531e-71■■■■■ 146.3
TROVE2P10155 KCNK4-210ENST00000545838 532 ntTSL 218.25■□□□□ 0.511e-71■■■■■ 146.3
TROVE2P10155 KCNK4-208ENST00000539651 545 ntTSL 417.84■□□□□ 0.451e-71■■■■■ 146.3
TROVE2P10155 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.64■□□□□ 0.411e-71■■■■■ 146.3
TROVE2P10155 KCNK4-209ENST00000541349 1450 ntTSL 1 (best)16.21■□□□□ 0.191e-71■■■■■ 146.3
TROVE2P10155 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.68■□□□□ 0.11e-71■■■■■ 146.3
TROVE2P10155 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.24□□□□□ -2.611e-71■■■■■ 146.3
TROVE2P10155 MZT2A-206ENST00000491265 2826 ntTSL 222.77■■□□□ 1.244e-11■■■■■ 146.2
TROVE2P10155 MZT2A-205ENST00000488586 234 ntTSL 512.9□□□□□ -0.344e-11■■■■■ 146.2
TROVE2P10155 SNORD3B-1-201ENST00000577988 758 ntBASIC12.77□□□□□ -0.372e-26■■■■■ 143.5
TROVE2P10155 SNORD3B-1-202ENST00000617128 218 nt10.65□□□□□ -0.72e-26■■■■■ 143.5
TROVE2P10155 SNORD3B-1-203ENST00000631292 217 nt10.55□□□□□ -0.722e-26■■■■■ 143.5
TROVE2P10155 Y_RNA.7-201ENST00000362352 102 ntBASIC0.01□□□□□ -2.413e-25■■■■■ 142
TROVE2P10155 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.691e-323■■■■■ 136.7
TROVE2P10155 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.161e-323■■■■■ 136.7
TROVE2P10155 EEF1A1-201ENST00000309268 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.691e-323■■■■■ 136.7
TROVE2P10155 EEF1A1-207ENST00000490569 1802 ntTSL 59.06□□□□□ -0.961e-323■■■■■ 136.7
TROVE2P10155 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.28□□□□□ -1.561e-323■■■■■ 136.7
TROVE2P10155 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.92□□□□□ -1.621e-323■■■■■ 136.7
TROVE2P10155 EEF1A1-208ENST00000491404 633 ntTSL 34.24□□□□□ -1.731e-323■■■■■ 136.7
TROVE2P10155 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.552e-22■■■■■ 136.3
TROVE2P10155 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.858e-30■■■■■ 135.6
TROVE2P10155 UBE2E2-201ENST00000335798 1330 ntTSL 1 (best)18.17■□□□□ 0.58e-30■■■■■ 135.6
TROVE2P10155 UBE2E2-205ENST00000452894 665 ntTSL 317.97■□□□□ 0.478e-30■■■■■ 135.6
TROVE2P10155 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.138e-30■■■■■ 135.6
TROVE2P10155 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.34□□□□□ -2.468e-30■■■■■ 135.6
TROVE2P10155 MZT2A-204ENST00000445782 980 ntTSL 223.27■■□□□ 1.326e-33■■■■■ 124.9
TROVE2P10155 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.846e-33■■■■■ 124.9
TROVE2P10155 MZT2A-202ENST00000410036 382 ntTSL 516.77■□□□□ 0.286e-33■■■■■ 124.9
TROVE2P10155 MZT2A-203ENST00000427024 679 ntTSL 313.92□□□□□ -0.186e-33■■■■■ 124.9
TROVE2P10155 RNY4P25-201ENST00000459254 96 ntBASIC-3.28□□□□□ -2.933e-27■■■■■ 124
TROVE2P10155 Y_RNA.123-201ENST00000363338 102 ntBASIC1.07□□□□□ -2.245e-89■■■■■ 119
TROVE2P10155 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.17□□□□□ -2.441e-14■■■■■ 119
TROVE2P10155 Y_RNA.404-201ENST00000383978 102 ntBASIC0.51□□□□□ -2.336e-38■■■■■ 117.7
TROVE2P10155 Y_RNA.33-201ENST00000362591 102 ntBASIC1.93□□□□□ -2.11e-323■■■■■ 116.6
TROVE2P10155 WDR33-203ENST00000408998 583 ntTSL 419.36■□□□□ 0.692e-28■■■■■ 111.8
TROVE2P10155 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.152e-28■■■■■ 111.8
TROVE2P10155 WDR33-205ENST00000436787 822 ntTSL 511.64□□□□□ -0.552e-28■■■■■ 111.8
TROVE2P10155 WDR33-204ENST00000409658 3104 ntTSL 1 (best) BASIC11.31□□□□□ -0.62e-28■■■■■ 111.8
TROVE2P10155 WDR33-202ENST00000393006 3574 ntTSL 1 (best) BASIC11.12□□□□□ -0.632e-28■■■■■ 111.8
TROVE2P10155 RNY4P7-201ENST00000364600 96 ntBASIC-2.63□□□□□ -2.832e-28■■■■■ 111.8
TROVE2P10155 Y_RNA.623-201ENST00000411128 95 ntBASIC1.84□□□□□ -2.111e-13■■■■■ 110.6
TROVE2P10155 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.354e-23■■■■■ 110.2
TROVE2P10155 Y_RNA.436-201ENST00000384097 102 ntBASIC0.52□□□□□ -2.334e-23■■■■■ 110.2
TROVE2P10155 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.12e-10■■■■■ 110
TROVE2P10155 INPP5D-205ENST00000451407 2545 ntTSL 218.86■□□□□ 0.611e-19■■■■■ 109.4
TROVE2P10155 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.241e-19■■■■■ 109.4
TROVE2P10155 INPP5D-204ENST00000445964 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.251e-19■■■■■ 109.4
TROVE2P10155 INPP5D-209ENST00000474278 568 ntTSL 512.18□□□□□ -0.461e-19■■■■■ 109.4
TROVE2P10155 INPP5D-214ENST00000496402 569 ntTSL 511.83□□□□□ -0.521e-19■■■■■ 109.4
TROVE2P10155 INPP5D-207ENST00000467393 431 ntTSL 35.1□□□□□ -1.591e-19■■■■■ 109.4
TROVE2P10155 Y_RNA.615-201ENST00000410769 117 ntBASIC0.87□□□□□ -2.272e-33■■■■■ 109
TROVE2P10155 RNY3P8-201ENST00000411366 126 ntBASIC-2.35□□□□□ -2.791e-22■■■■■ 108.8
TROVE2P10155 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.05□□□□□ -2.424e-35■■■■■ 105.3
TROVE2P10155 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC14.01□□□□□ -0.175e-23■■■■■ 104
TROVE2P10155 ASIC2-202ENST00000359872 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.425e-23■■■■■ 104
TROVE2P10155 ATPAF1-203ENST00000460928 869 ntTSL 24.91□□□□□ -1.621e-17■■■■■ 103.9
TROVE2P10155 RN7SL2-201ENST00000490232 300 ntBASIC11.32□□□□□ -0.61e-323■■■■■ 101.9
TROVE2P10155 AL627171.2-202ENST00000634923 923 ntTSL 5 BASIC8.72□□□□□ -1.011e-323■■■■■ 101.9
TROVE2P10155 AL627171.2-201ENST00000635177 1090 ntTSL 5 BASIC8.38□□□□□ -1.071e-323■■■■■ 101.9
TROVE2P10155 Y_RNA.169-201ENST00000363745 96 ntBASIC1.25□□□□□ -2.212e-8■■■■■ 98.6
TROVE2P10155 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.55□□□□□ -2.825e-41■■■■■ 97.3
TROVE2P10155 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.05□□□□□ -2.421e-323■■■■■ 95.8
TROVE2P10155 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.42□□□□□ -2.489e-9■■■■■ 95.1
TROVE2P10155 TMOD3-201ENST00000308580 8255 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.692e-7■■■■■ 95
TROVE2P10155 TMOD3-207ENST00000560549 1474 ntTSL 1 (best)4.24□□□□□ -1.732e-7■■■■■ 95
TROVE2P10155 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.58□□□□□ -2.52e-7■■■■■ 95
TROVE2P10155 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.52□□□□□ -2.491e-14■■■■■ 94.7
TROVE2P10155 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.883e-12■■■■■ 93.7
TROVE2P10155 Y_RNA.111-201ENST00000363248 100 ntBASIC1.92□□□□□ -2.13e-12■■■■■ 93.7
TROVE2P10155 NELL2-218ENST00000551949 500 ntTSL 410.36□□□□□ -0.751e-8■■■■■ 93.3
TROVE2P10155 NELL2-219ENST00000552993 1053 ntTSL 58.6□□□□□ -1.031e-8■■■■■ 93.3
TROVE2P10155 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.88□□□□□ -1.471e-8■■■■■ 93.3
TROVE2P10155 Y_RNA.295-201ENST00000364918 102 ntBASIC0.55□□□□□ -2.321e-8■■■■■ 93.3
TROVE2P10155 NMT1-208ENST00000588975 183 ntTSL 1 (best)14.39□□□□□ -0.111e-9■■■■■ 93.3
TROVE2P10155 NMT1-209ENST00000590114 666 ntTSL 312.03□□□□□ -0.481e-9■■■■■ 93.3
TROVE2P10155 NMT1-203ENST00000585561 807 ntTSL 310.61□□□□□ -0.711e-9■■■■■ 93.3
TROVE2P10155 NMT1-202ENST00000543908 1066 ntTSL 210.09□□□□□ -0.791e-9■■■■■ 93.3
TROVE2P10155 NMT1-212ENST00000592654 558 ntTSL 46.13□□□□□ -1.431e-9■■■■■ 93.3
TROVE2P10155 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.9□□□□□ -2.551e-9■■■■■ 93.3
TROVE2P10155 Y_RNA.48-201ENST00000362710 103 ntBASIC0.75□□□□□ -2.291e-47■■■■■ 89.8
TROVE2P10155 Y_RNA.222-201ENST00000364264 102 ntBASIC0□□□□□ -2.419e-21■■■■■ 89.2
TROVE2P10155 IDH1-206ENST00000451391 563 ntTSL 317.01■□□□□ 0.313e-19■■■■■ 88
TROVE2P10155 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.76□□□□□ -2.532e-20■■■■■ 87.4
TROVE2P10155 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.07■□□□□ 0.483e-16■■■■■ 84.7
TROVE2P10155 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.25■□□□□ 0.353e-16■■■■■ 84.7
TROVE2P10155 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.01□□□□□ -0.013e-16■■■■■ 84.7
TROVE2P10155 TTC8-205ENST00000358622 2297 ntTSL 5 BASIC12.31□□□□□ -0.443e-16■■■■■ 84.7
TROVE2P10155 TTC8-210ENST00000555057 2113 ntTSL 1 (best)11.94□□□□□ -0.53e-16■■■■■ 84.7
TROVE2P10155 TTC8-207ENST00000536576 2209 ntTSL 5 BASIC11.71□□□□□ -0.533e-16■■■■■ 84.7
TROVE2P10155 TTC8-201ENST00000338104 2226 ntTSL 1 (best) BASIC11.7□□□□□ -0.543e-16■■■■■ 84.7
TROVE2P10155 TTC8-211ENST00000556077 1020 ntTSL 511.1□□□□□ -0.633e-16■■■■■ 84.7
TROVE2P10155 TTC8-206ENST00000380656 2171 ntTSL 2 BASIC10.7□□□□□ -0.73e-16■■■■■ 84.7
TROVE2P10155 TTC8-214ENST00000556651 599 ntTSL 510.38□□□□□ -0.753e-16■■■■■ 84.7
TROVE2P10155 TTC8-204ENST00000354441 1342 ntTSL 1 (best) BASIC9.96□□□□□ -0.823e-16■■■■■ 84.7
TROVE2P10155 TTC8-213ENST00000556567 943 ntTSL 29.92□□□□□ -0.823e-16■■■■■ 84.7
TROVE2P10155 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.183e-16■■■■■ 84.7
TROVE2P10155 TTC8-209ENST00000554686 1859 ntTSL 57.09□□□□□ -1.273e-16■■■■■ 84.7
Retrieved 100 of 4,203 protein–RNA pairs in 31.3 ms