RNA–Protein interactions for RNA: ENST00000622513.4

TTC8-217, Transcript of tetratricopeptide repeat domain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC8, Length 5,270 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-217ENST00000622513 NISCHQ9Y2I1 1504 aa11.93□□□□□ -0.5
TTC8-217ENST00000622513 PELP1Q8IZL8 1130 aaKnown RBP11.87□□□□□ -0.51
TTC8-217ENST00000622513 HRCP23327 699 aa11.65□□□□□ -0.55
TTC8-217ENST00000622513 MYT1Q01538 1121 aa11.58□□□□□ -0.56
TTC8-217ENST00000622513 PCGF6Q9BYE7 350 aa11.56□□□□□ -0.56
TTC8-217ENST00000622513 SUPT5HO00267 1087 aaKnown RBP11.5□□□□□ -0.57
TTC8-217ENST00000622513 PPARGC1BQ86YN6 1023 aaKnown RBP11.4□□□□□ -0.58
TTC8-217ENST00000622513 SHROOM4Q9ULL8 1493 aa11.3□□□□□ -0.6
TTC8-217ENST00000622513 ZEB1P37275 1124 aaPredicted RBP11.21□□□□□ -0.62
TTC8-217ENST00000622513 CENPBP07199 599 aaPredicted RBP11.14□□□□□ -0.63
TTC8-217ENST00000622513 TRIM26Q12899 539 aaPredicted RBP11.05□□□□□ -0.64
TTC8-217ENST00000622513 SCAF1Q9H7N4 1312 aaKnown RBP11.04□□□□□ -0.64
TTC8-217ENST00000622513 CHIC1Q5VXU3 224 aa10.98□□□□□ -0.65
TTC8-217ENST00000622513 DCAF8L2P0C7V8 631 aa10.95□□□□□ -0.66
TTC8-217ENST00000622513 GTF3C3Q9Y5Q9 886 aa10.91□□□□□ -0.66
TTC8-217ENST00000622513 ACIN1Q9UKV3 1341 aaKnown RBP10.89□□□□□ -0.67
TTC8-217ENST00000622513 LOC105371045A0A1W2PR82 267 aa10.86□□□□□ -0.67
TTC8-217ENST00000622513 CCER1Q8TC90 406 aaPredicted RBP10.84□□□□□ -0.67
TTC8-217ENST00000622513 YTHDC1Q96MU7 727 aaKnown RBP10.83□□□□□ -0.68
TTC8-217ENST00000622513 EHMT2Q96KQ7 1210 aa10.82□□□□□ -0.68
TTC8-217ENST00000622513 TTBK1Q5TCY1 1321 aaPredicted RBP10.77□□□□□ -0.69
TTC8-217ENST00000622513 NEUROD1Q13562 356 aa10.77□□□□□ -0.69
TTC8-217ENST00000622513 DIEXFQ68CQ4 756 aaKnown RBP10.74□□□□□ -0.69
TTC8-217ENST00000622513 DCAF1Q9Y4B6 1507 aa10.73□□□□□ -0.69
TTC8-217ENST00000622513 FAM9AQ8IZU1 332 aaPredicted RBP10.73□□□□□ -0.69
TTC8-217ENST00000622513 MYO15BQ96JP2 1530 aa10.71□□□□□ -0.69
TTC8-217ENST00000622513 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.62□□□□□ -0.71
TTC8-217ENST00000622513 TRIM41Q8WV44 630 aa10.59□□□□□ -0.71
TTC8-217ENST00000622513 ERICH6Q7L0X2 663 aa10.56□□□□□ -0.72
TTC8-217ENST00000622513 CCDC180Q9P1Z9 1646 aa10.54□□□□□ -0.72
TTC8-217ENST00000622513 BCL11AQ9H165 835 aa10.5□□□□□ -0.73
TTC8-217ENST00000622513 ZNF316A6NFI3 1004 aaPredicted RBP10.44□□□□□ -0.74
TTC8-217ENST00000622513 ANP32EQ9BTT0 268 aa10.43□□□□□ -0.74
TTC8-217ENST00000622513 NEFLP07196 543 aa10.41□□□□□ -0.74
TTC8-217ENST00000622513 CLSPNQ9HAW4 1339 aa10.34□□□□□ -0.75
TTC8-217ENST00000622513 BCANQ96GW7 911 aa10.32□□□□□ -0.76
TTC8-217ENST00000622513 APLP2Q06481 763 aa10.3□□□□□ -0.76
TTC8-217ENST00000622513 MIER1Q8N108 512 aa10.29□□□□□ -0.76
TTC8-217ENST00000622513 HNRNPUL2Q1KMD3 747 aaKnown RBP10.24□□□□□ -0.77
TTC8-217ENST00000622513 CSRNP3Q8WYN3 585 aa10.23□□□□□ -0.77
TTC8-217ENST00000622513 SUPT16HQ9Y5B9 1047 aaKnown RBP10.2□□□□□ -0.78
TTC8-217ENST00000622513 UBTFP17480 764 aaKnown RBP10.19□□□□□ -0.78
TTC8-217ENST00000622513 TSHZ2Q9NRE2 1034 aa10.16□□□□□ -0.78
TTC8-217ENST00000622513 FKBP8Q14318 412 aa10.14□□□□□ -0.79
TTC8-217ENST00000622513 MYT1LQ9UL68 1186 aa10.11□□□□□ -0.79
TTC8-217ENST00000622513 RTL5Q5HYW3 569 aaPredicted RBP10.11□□□□□ -0.79
TTC8-217ENST00000622513 CDK11AQ9UQ88 783 aaPredicted RBP10.1□□□□□ -0.79
TTC8-217ENST00000622513 ZCCHC6Q5VYS8 1495 aaKnown RBP10.09□□□□□ -0.79
TTC8-217ENST00000622513 PRKCSHP14314 528 aaPredicted RBP10.08□□□□□ -0.8
TTC8-217ENST00000622513 RANGAP1P46060 587 aaPredicted RBP10.06□□□□□ -0.8
TTC8-217ENST00000622513 RBM19Q9Y4C8 960 aaKnown RBP10.02□□□□□ -0.81
TTC8-217ENST00000622513 ITGAEP38570 1179 aa10.01□□□□□ -0.81
TTC8-217ENST00000622513 NBR1Q14596 966 aa9.96□□□□□ -0.81
TTC8-217ENST00000622513 DEKP35659 375 aaKnown RBP9.94□□□□□ -0.82
TTC8-217ENST00000622513 EIF5BO60841 1220 aaKnown RBP9.93□□□□□ -0.82
TTC8-217ENST00000622513 ANP32CO43423 234 aa9.92□□□□□ -0.82
TTC8-217ENST00000622513 TRIM52Q96A61 297 aa9.9□□□□□ -0.82
TTC8-217ENST00000622513 ANP32AP39687 249 aaKnown RBP9.88□□□□□ -0.83
TTC8-217ENST00000622513 DDX10Q13206 875 aaKnown RBP9.86□□□□□ -0.83
TTC8-217ENST00000622513 RTN4Q9NQC3 1192 aaKnown RBP9.84□□□□□ -0.83
TTC8-217ENST00000622513 IRX6P78412 446 aaPredicted RBP9.84□□□□□ -0.84
TTC8-217ENST00000622513 DAXXQ9UER7 740 aaPredicted RBP9.83□□□□□ -0.84
TTC8-217ENST00000622513 CEP162Q5TB80 1403 aa9.81□□□□□ -0.84
TTC8-217ENST00000622513 ZBTB47Q9UFB7 747 aaPredicted RBP9.8□□□□□ -0.84
TTC8-217ENST00000622513 HNRNPUQ00839 825 aaKnown RBP eCLIP9.8□□□□□ -0.84
TTC8-217ENST00000622513 ANO8Q9HCE9 1232 aaPredicted RBP9.8□□□□□ -0.84
TTC8-217ENST00000622513 NOP58Q9Y2X3 529 aaKnown RBP9.79□□□□□ -0.84
TTC8-217ENST00000622513 ERICH6BQ5W0A0 696 aa9.78□□□□□ -0.84
TTC8-217ENST00000622513 CCDC136Q96JN2 1154 aa9.77□□□□□ -0.84
TTC8-217ENST00000622513 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.76□□□□□ -0.85
TTC8-217ENST00000622513 FANCIQ9NVI1 1328 aa9.76□□□□□ -0.85
TTC8-217ENST00000622513 GLIPR1L2Q4G1C9 344 aa9.75□□□□□ -0.85
TTC8-217ENST00000622513 NPM2Q86SE8 214 aaKnown RBP9.75□□□□□ -0.85
TTC8-217ENST00000622513 RSF1Q96T23 1441 aaPredicted RBP9.74□□□□□ -0.85
TTC8-217ENST00000622513 KCNH8Q96L42 1107 aa9.73□□□□□ -0.85
TTC8-217ENST00000622513 PPP4R2Q9NY27 417 aa9.7□□□□□ -0.86
TTC8-217ENST00000622513 TNIKQ9UKE5 1360 aa9.7□□□□□ -0.86
TTC8-217ENST00000622513 MSH5O43196 834 aa9.69□□□□□ -0.86
TTC8-217ENST00000622513 ATP1B4Q9UN42 357 aaPredicted RBP9.69□□□□□ -0.86
TTC8-217ENST00000622513 SALL2Q9Y467 1007 aaPredicted RBP9.69□□□□□ -0.86
TTC8-217ENST00000622513 WRNQ14191 1432 aaPredicted RBP eCLIP9.68□□□□□ -0.86
TTC8-217ENST00000622513 CNGB1Q14028 1251 aaPredicted RBP9.68□□□□□ -0.86
TTC8-217ENST00000622513 HIRIP3Q9BW71 556 aaPredicted RBP9.68□□□□□ -0.86
TTC8-217ENST00000622513 B4GALNT3Q6L9W6 998 aa9.65□□□□□ -0.86
TTC8-217ENST00000622513 NEFMP07197 916 aa9.65□□□□□ -0.86
TTC8-217ENST00000622513 CCER2I3L3R5 266 aa9.64□□□□□ -0.87
TTC8-217ENST00000622513 RB1CC1Q8TDY2 1594 aa9.64□□□□□ -0.87
TTC8-217ENST00000622513 FAM50AQ14320 339 aaKnown RBP9.63□□□□□ -0.87
TTC8-217ENST00000622513 CLIP1P30622 1438 aa9.62□□□□□ -0.87
TTC8-217ENST00000622513 FAM9BQ8IZU0 186 aa9.62□□□□□ -0.87
TTC8-217ENST00000622513 LAS1LQ9Y4W2 734 aaKnown RBP9.62□□□□□ -0.87
TTC8-217ENST00000622513 POLR3GLQ9BT43 218 aa9.61□□□□□ -0.87
TTC8-217ENST00000622513 GOLGA3Q08378 1498 aa9.6□□□□□ -0.87
TTC8-217ENST00000622513 PPM1GO15355 546 aaPredicted RBP9.6□□□□□ -0.87
TTC8-217ENST00000622513 ABCC9O60706 1549 aa9.59□□□□□ -0.87
TTC8-217ENST00000622513 IL27Q8NEV9 243 aa9.58□□□□□ -0.88
TTC8-217ENST00000622513 EEA1Q15075 1411 aa9.58□□□□□ -0.88
TTC8-217ENST00000622513 IPO9Q96P70 1041 aaKnown RBP9.58□□□□□ -0.88
TTC8-217ENST00000622513 SCRIBQ14160 1630 aa9.56□□□□□ -0.88
TTC8-217ENST00000622513 TONSLQ96HA7 1378 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms