Protein–RNA interactions for Protein: P0CX28

RPL42B, 60S ribosomal protein L42-B, yeastyeast

Known RBP Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL42BP0CX28 YGR021WYGR021W 873 nt9.27□□□□□ -0.93
RPL42BP0CX28 YFL021C-AYFL021C-A 855 nt9.26□□□□□ -0.93
RPL42BP0CX28 SEC11YIR022W 504 nt9.26□□□□□ -0.93
RPL42BP0CX28 IRC15YPL017C 1500 nt9.23□□□□□ -0.93
RPL42BP0CX28 PCH2YBR186W 1695 nt9.19□□□□□ -0.94
RPL42BP0CX28 GIS3YLR094C 1509 nt9.18□□□□□ -0.94
RPL42BP0CX28 ART5YGR068C 1761 nt9.17□□□□□ -0.94
RPL42BP0CX28 GFD2YCL036W 1701 nt9.17□□□□□ -0.94
RPL42BP0CX28 PET9YBL030C 957 nt9.16□□□□□ -0.94
RPL42BP0CX28 RDN37-1RDN37-1 5354 nt9.14□□□□□ -0.95
RPL42BP0CX28 RDN37-2RDN37-2 5354 nt9.14□□□□□ -0.95
RPL42BP0CX28 YCH1YGR203W 447 nt9.14□□□□□ -0.95
RPL42BP0CX28 HOM6YJR139C 1080 nt9.14□□□□□ -0.95
RPL42BP0CX28 GUT2YIL155C 1950 nt9.13□□□□□ -0.95
RPL42BP0CX28 SHU1YHL006C 453 nt9.11□□□□□ -0.95
RPL42BP0CX28 RTS2YOR077W 699 nt9.09□□□□□ -0.95
RPL42BP0CX28 CUE1YMR264W 612 nt9.07□□□□□ -0.96
RPL42BP0CX28 YSC84YHR016C 1407 nt9.06□□□□□ -0.96
RPL42BP0CX28 YAL037C-BYAL037C-B 975 nt9.06□□□□□ -0.96
RPL42BP0CX28 FPS1YLL043W 2010 nt9.05□□□□□ -0.96
RPL42BP0CX28 YNL195CYNL195C 786 nt9.04□□□□□ -0.96
RPL42BP0CX28 RKM5YLR137W 1104 nt9.02□□□□□ -0.97
RPL42BP0CX28 MNP1YGL068W 585 nt9.01□□□□□ -0.97
RPL42BP0CX28 YIL100WYIL100W 354 nt9□□□□□ -0.97
RPL42BP0CX28 TIR4YOR009W 1464 nt9□□□□□ -0.97
RPL42BP0CX28 YHL050CYHL050C 2094 nt8.98□□□□□ -0.97
RPL42BP0CX28 YMR057CYMR057C 372 nt8.96□□□□□ -0.98
RPL42BP0CX28 RTF1YGL244W 1677 nt8.95□□□□□ -0.98
RPL42BP0CX28 YLR236CYLR236C 324 nt8.94□□□□□ -0.98
RPL42BP0CX28 RRT12YCR045C 1476 nt8.93□□□□□ -0.98
RPL42BP0CX28 BOP3YNL042W 1191 nt8.92□□□□□ -0.98
RPL42BP0CX28 PIB2YGL023C 1908 nt8.91□□□□□ -0.98
RPL42BP0CX28 YKL097CYKL097C 411 nt8.9□□□□□ -0.98
RPL42BP0CX28 NPL3YDR432W 1245 nt8.86□□□□□ -0.99
RPL42BP0CX28 YJL152WYJL152W 360 nt8.86□□□□□ -0.99
RPL42BP0CX28 YCL048W-AYCL048W-A 240 nt8.85□□□□□ -0.99
RPL42BP0CX28 YLR154C-GYLR154C-G 150 nt8.84□□□□□ -0.99
RPL42BP0CX28 YOL037CYOL037C 354 nt8.81□□□□□ -1
RPL42BP0CX28 PTK1YKL198C 1989 nt8.75□□□□□ -1.01
RPL42BP0CX28 UME6YDR207C 2511 nt8.71□□□□□ -1.02
RPL42BP0CX28 NCP1YHR042W 2076 nt8.69□□□□□ -1.02
RPL42BP0CX28 YFL054CYFL054C 1941 nt8.64□□□□□ -1.03
RPL42BP0CX28 IDH1YNL037C 1083 nt8.62□□□□□ -1.03
RPL42BP0CX28 FMP52YER004W 696 nt8.61□□□□□ -1.03
RPL42BP0CX28 WHI5YOR083W 888 nt8.61□□□□□ -1.03
RPL42BP0CX28 LCB1YMR296C 1677 nt8.59□□□□□ -1.03
RPL42BP0CX28 YLR281CYLR281C 468 nt8.57□□□□□ -1.04
RPL42BP0CX28 GBP2YCL011C 1284 nt8.57□□□□□ -1.04
RPL42BP0CX28 RRD1YIL153W 1182 nt8.56□□□□□ -1.04
RPL42BP0CX28 SPT8YLR055C 1809 nt8.56□□□□□ -1.04
RPL42BP0CX28 TCD2YKL027W 1344 nt8.54□□□□□ -1.04
RPL42BP0CX28 YOR139CYOR139C 393 nt8.53□□□□□ -1.04
RPL42BP0CX28 SIM1YIL123W 1431 nt8.53□□□□□ -1.04
RPL42BP0CX28 IMP2'YIL154C 1041 nt8.52□□□□□ -1.05
RPL42BP0CX28 PCM1YEL058W 1674 nt8.52□□□□□ -1.05
RPL42BP0CX28 BOR1YNL275W 1731 nt8.48□□□□□ -1.05
RPL42BP0CX28 DED1YOR204W 1815 nt8.46□□□□□ -1.06
RPL42BP0CX28 SNF6YHL025W 999 nt8.46□□□□□ -1.06
RPL42BP0CX28 CWP1YKL096W 720 nt8.42□□□□□ -1.06
RPL42BP0CX28 FMT1YBL013W 1206 nt8.42□□□□□ -1.06
RPL42BP0CX28 BIO4YNR057C 714 nt8.42□□□□□ -1.06
RPL42BP0CX28 LYS4YDR234W 2082 nt8.41□□□□□ -1.06
RPL42BP0CX28 DSK2YMR276W 1122 nt8.41□□□□□ -1.06
RPL42BP0CX28 ADH2YMR303C 1047 nt8.41□□□□□ -1.06
RPL42BP0CX28 SWE1YJL187C 2460 nt8.41□□□□□ -1.06
RPL42BP0CX28 ERF2YLR246W 1080 nt8.39□□□□□ -1.07
RPL42BP0CX28 YDR433WYDR433W 441 nt8.38□□□□□ -1.07
RPL42BP0CX28 PUS2YGL063W 1113 nt8.38□□□□□ -1.07
RPL42BP0CX28 YCL042WYCL042W 360 nt8.38□□□□□ -1.07
RPL42BP0CX28 SOR2YDL246C 1074 nt8.37□□□□□ -1.07
RPL42BP0CX28 SOR1YJR159W 1074 nt8.37□□□□□ -1.07
RPL42BP0CX28 YIH1YCR059C 777 nt8.33□□□□□ -1.08
RPL42BP0CX28 CRR1YLR213C 1269 nt8.32□□□□□ -1.08
RPL42BP0CX28 FMP45YDL222C 930 nt8.31□□□□□ -1.08
RPL42BP0CX28 MXR2YCL033C 507 nt8.3□□□□□ -1.08
RPL42BP0CX28 MCH5YOR306C 1566 nt8.3□□□□□ -1.08
RPL42BP0CX28 RNQ1YCL028W 1218 nt8.29□□□□□ -1.08
RPL42BP0CX28 HSP60YLR259C 1719 nt8.29□□□□□ -1.08
RPL42BP0CX28 HEM12YDR047W 1089 nt8.27□□□□□ -1.09
RPL42BP0CX28 ERV46YAL042W 1248 nt8.27□□□□□ -1.09
RPL42BP0CX28 YKR040CYKR040C 504 nt8.27□□□□□ -1.09
RPL42BP0CX28 YLL053CYLL053C 459 nt8.27□□□□□ -1.09
RPL42BP0CX28 YFL067WYFL067W 528 nt8.26□□□□□ -1.09
RPL42BP0CX28 YHR056W-AYHR056W-A 435 nt8.26□□□□□ -1.09
RPL42BP0CX28 GLK1YCL040W 1503 nt8.25□□□□□ -1.09
RPL42BP0CX28 tM(CAU)CtM(CAU)C 72 nt8.25□□□□□ -1.09
RPL42BP0CX28 IMT4tM(CAU)E 72 nt8.25□□□□□ -1.09
RPL42BP0CX28 IMT3tM(CAU)J3 72 nt8.25□□□□□ -1.09
RPL42BP0CX28 IMT1tM(CAU)O1 72 nt8.25□□□□□ -1.09
RPL42BP0CX28 IMT2tM(CAU)P 72 nt8.25□□□□□ -1.09
RPL42BP0CX28 NME1NME1 340 nt8.25□□□□□ -1.09
RPL42BP0CX28 RAX1YOR301W 1308 nt8.24□□□□□ -1.09
RPL42BP0CX28 FRD1YEL047C 1413 nt8.22□□□□□ -1.09
RPL42BP0CX28 YPR011CYPR011C 981 nt8.21□□□□□ -1.1
RPL42BP0CX28 FTR1YER145C 1215 nt8.2□□□□□ -1.1
RPL42BP0CX28 LPX1YOR084W 1164 nt8.2□□□□□ -1.1
RPL42BP0CX28 ATF2YGR177C 1608 nt8.2□□□□□ -1.1
RPL42BP0CX28 DDR2YOL052C-A 186 nt8.19□□□□□ -1.1
RPL42BP0CX28 MIC10YCL057C-A 294 nt8.19□□□□□ -1.1
RPL42BP0CX28 FUR4YBR021W 1902 nt8.19□□□□□ -1.1
Retrieved 100 of 7,029 protein–RNA pairs in 31.5 ms