Protein–RNA interactions for Protein: P0CG63

UBI4, Polyubiquitin, yeastyeast

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBI4P0CG63 SUF10tP(AGG)N 72 nt10.41□□□□□ -0.74
UBI4P0CG63 GFD2YCL036W 1701 nt10.36□□□□□ -0.75
UBI4P0CG63 RTF1YGL244W 1677 nt10.35□□□□□ -0.75
UBI4P0CG63 YHL050CYHL050C 2094 nt10.35□□□□□ -0.75
UBI4P0CG63 LSM3YLR438C-A 270 nt10.34□□□□□ -0.75
UBI4P0CG63 ART5YGR068C 1761 nt10.33□□□□□ -0.76
UBI4P0CG63 RTS2YOR077W 699 nt10.32□□□□□ -0.76
UBI4P0CG63 YJL225CYJL225C 5277 nt10.26□□□□□ -0.77
UBI4P0CG63 BOP3YNL042W 1191 nt10.26□□□□□ -0.77
UBI4P0CG63 WWM1YFL010C 636 nt10.25□□□□□ -0.77
UBI4P0CG63 PET9YBL030C 957 nt10.25□□□□□ -0.77
UBI4P0CG63 CUE1YMR264W 612 nt10.23□□□□□ -0.77
UBI4P0CG63 RRT12YCR045C 1476 nt10.23□□□□□ -0.77
UBI4P0CG63 YNL195CYNL195C 786 nt10.21□□□□□ -0.77
UBI4P0CG63 PTK1YKL198C 1989 nt10.18□□□□□ -0.78
UBI4P0CG63 YCH1YGR203W 447 nt10.17□□□□□ -0.78
UBI4P0CG63 YFL021C-AYFL021C-A 855 nt10.14□□□□□ -0.79
UBI4P0CG63 YIL100WYIL100W 354 nt10.13□□□□□ -0.79
UBI4P0CG63 TIR4YOR009W 1464 nt10.08□□□□□ -0.8
UBI4P0CG63 YGR021WYGR021W 873 nt10.06□□□□□ -0.8
UBI4P0CG63 FPS1YLL043W 2010 nt10.04□□□□□ -0.8
UBI4P0CG63 NCP1YHR042W 2076 nt10.03□□□□□ -0.8
UBI4P0CG63 PST2YDR032C 597 nt10.02□□□□□ -0.81
UBI4P0CG63 YMR057CYMR057C 372 nt10.02□□□□□ -0.81
UBI4P0CG63 BOR1YNL275W 1731 nt10□□□□□ -0.81
UBI4P0CG63 YLR236CYLR236C 324 nt10□□□□□ -0.81
UBI4P0CG63 HOM6YJR139C 1080 nt9.97□□□□□ -0.81
UBI4P0CG63 YFL054CYFL054C 1941 nt9.97□□□□□ -0.81
UBI4P0CG63 SPT8YLR055C 1809 nt9.93□□□□□ -0.82
UBI4P0CG63 RKM5YLR137W 1104 nt9.83□□□□□ -0.84
UBI4P0CG63 RDN37-1RDN37-1 5354 nt9.83□□□□□ -0.84
UBI4P0CG63 RDN37-2RDN37-2 5354 nt9.83□□□□□ -0.84
UBI4P0CG63 MNP1YGL068W 585 nt9.82□□□□□ -0.84
UBI4P0CG63 LCB1YMR296C 1677 nt9.82□□□□□ -0.84
UBI4P0CG63 UME6YDR207C 2511 nt9.82□□□□□ -0.84
UBI4P0CG63 YCL048W-AYCL048W-A 240 nt9.81□□□□□ -0.84
UBI4P0CG63 NPL3YDR432W 1245 nt9.78□□□□□ -0.84
UBI4P0CG63 YAL037C-BYAL037C-B 975 nt9.77□□□□□ -0.85
UBI4P0CG63 SHU1YHL006C 453 nt9.76□□□□□ -0.85
UBI4P0CG63 YJL152WYJL152W 360 nt9.75□□□□□ -0.85
UBI4P0CG63 SWE1YJL187C 2460 nt9.73□□□□□ -0.85
UBI4P0CG63 HSP60YLR259C 1719 nt9.71□□□□□ -0.85
UBI4P0CG63 YLR154C-GYLR154C-G 150 nt9.69□□□□□ -0.86
UBI4P0CG63 LYS4YDR234W 2082 nt9.62□□□□□ -0.87
UBI4P0CG63 ALG12YNR030W 1656 nt9.61□□□□□ -0.87
UBI4P0CG63 MCH5YOR306C 1566 nt9.6□□□□□ -0.87
UBI4P0CG63 SIM1YIL123W 1431 nt9.6□□□□□ -0.87
UBI4P0CG63 GLK1YCL040W 1503 nt9.59□□□□□ -0.87
UBI4P0CG63 FMP52YER004W 696 nt9.57□□□□□ -0.88
UBI4P0CG63 RRD1YIL153W 1182 nt9.54□□□□□ -0.88
UBI4P0CG63 PCM1YEL058W 1674 nt9.53□□□□□ -0.88
UBI4P0CG63 BIO4YNR057C 714 nt9.48□□□□□ -0.89
UBI4P0CG63 FUR4YBR021W 1902 nt9.48□□□□□ -0.89
UBI4P0CG63 YOL037CYOL037C 354 nt9.46□□□□□ -0.9
UBI4P0CG63 DSK2YMR276W 1122 nt9.42□□□□□ -0.9
UBI4P0CG63 DED1YOR204W 1815 nt9.41□□□□□ -0.9
UBI4P0CG63 SNF6YHL025W 999 nt9.41□□□□□ -0.9
UBI4P0CG63 ERF2YLR246W 1080 nt9.41□□□□□ -0.9
UBI4P0CG63 IDH1YNL037C 1083 nt9.41□□□□□ -0.9
UBI4P0CG63 TCD2YKL027W 1344 nt9.4□□□□□ -0.9
UBI4P0CG63 YHR056W-AYHR056W-A 435 nt9.4□□□□□ -0.9
UBI4P0CG63 GBP2YCL011C 1284 nt9.4□□□□□ -0.9
UBI4P0CG63 CRR1YLR213C 1269 nt9.39□□□□□ -0.91
UBI4P0CG63 PRP4YPR178W 1398 nt9.38□□□□□ -0.91
UBI4P0CG63 Q0182Q0182 405 nt9.38□□□□□ -0.91
UBI4P0CG63 AAC1YMR056C 930 nt9.38□□□□□ -0.91
UBI4P0CG63 YEL076C-AYEL076C-A 651 nt9.36□□□□□ -0.91
UBI4P0CG63 YEL076CYEL076C 651 nt9.36□□□□□ -0.91
UBI4P0CG63 YLR464WYLR464W 651 nt9.36□□□□□ -0.91
UBI4P0CG63 FMT1YBL013W 1206 nt9.36□□□□□ -0.91
UBI4P0CG63 ADH2YMR303C 1047 nt9.36□□□□□ -0.91
UBI4P0CG63 CWP1YKL096W 720 nt9.35□□□□□ -0.91
UBI4P0CG63 NAR1YNL240C 1476 nt9.34□□□□□ -0.91
UBI4P0CG63 CCA1YER168C 1641 nt9.34□□□□□ -0.91
UBI4P0CG63 DPS1YLL018C 1674 nt9.33□□□□□ -0.92
UBI4P0CG63 YKL097CYKL097C 411 nt9.33□□□□□ -0.92
UBI4P0CG63 RAX1YOR301W 1308 nt9.31□□□□□ -0.92
UBI4P0CG63 WHI5YOR083W 888 nt9.3□□□□□ -0.92
UBI4P0CG63 HEM12YDR047W 1089 nt9.29□□□□□ -0.92
UBI4P0CG63 BMT6YLR063W 1098 nt9.29□□□□□ -0.92
UBI4P0CG63 YIH1YCR059C 777 nt9.26□□□□□ -0.93
UBI4P0CG63 MIC10YCL057C-A 294 nt9.26□□□□□ -0.93
UBI4P0CG63 SOR2YDL246C 1074 nt9.24□□□□□ -0.93
UBI4P0CG63 SOR1YJR159W 1074 nt9.24□□□□□ -0.93
UBI4P0CG63 YLR281CYLR281C 468 nt9.23□□□□□ -0.93
UBI4P0CG63 YKR005CYKR005C 1578 nt9.22□□□□□ -0.93
UBI4P0CG63 YLL053CYLL053C 459 nt9.22□□□□□ -0.93
UBI4P0CG63 SNG1YGR197C 1644 nt9.22□□□□□ -0.93
UBI4P0CG63 BIO5YNR056C 1686 nt9.22□□□□□ -0.93
UBI4P0CG63 ATF2YGR177C 1608 nt9.21□□□□□ -0.93
UBI4P0CG63 YFL067WYFL067W 528 nt9.2□□□□□ -0.94
UBI4P0CG63 SNF1YDR477W 1902 nt9.19□□□□□ -0.94
UBI4P0CG63 RNQ1YCL028W 1218 nt9.19□□□□□ -0.94
UBI4P0CG63 YCL042WYCL042W 360 nt9.19□□□□□ -0.94
UBI4P0CG63 WSC2YNL283C 1512 nt9.17□□□□□ -0.94
UBI4P0CG63 PBP1YGR178C 2169 nt9.17□□□□□ -0.94
UBI4P0CG63 CYT2YKL087C 675 nt9.16□□□□□ -0.94
UBI4P0CG63 IMP2'YIL154C 1041 nt9.14□□□□□ -0.95
UBI4P0CG63 YDR433WYDR433W 441 nt9.13□□□□□ -0.95
UBI4P0CG63 FTR1YER145C 1215 nt9.12□□□□□ -0.95
Retrieved 100 of 7,029 protein–RNA pairs in 16.1 ms