Protein–RNA interactions for Protein: O88572

Lrp6, Low-density lipoprotein receptor-related protein 6, mousemouse

Predictions only

Length 1,613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrp6O88572 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC38.49■■■■□ 3.75
Lrp6O88572 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC38.44■■■■□ 3.74
Lrp6O88572 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC38.41■■■■□ 3.74
Lrp6O88572 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC38.3■■■■□ 3.72
Lrp6O88572 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC38.28■■■■□ 3.72
Lrp6O88572 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC38.27■■■■□ 3.72
Lrp6O88572 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC38.23■■■■□ 3.71
Lrp6O88572 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC38.23■■■■□ 3.71
Lrp6O88572 Psd-208ENSMUST00000224556 2034 ntBASIC38.17■■■■□ 3.7
Lrp6O88572 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC38.17■■■■□ 3.7
Lrp6O88572 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC38.14■■■■□ 3.7
Lrp6O88572 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC38.12■■■■□ 3.69
Lrp6O88572 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC38.02■■■■□ 3.68
Lrp6O88572 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC38.01■■■■□ 3.67
Lrp6O88572 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC38.01■■■■□ 3.67
Lrp6O88572 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC38■■■■□ 3.67
Lrp6O88572 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
Lrp6O88572 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC37.94■■■■□ 3.66
Lrp6O88572 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC37.84■■■■□ 3.65
Lrp6O88572 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC37.82■■■■□ 3.64
Lrp6O88572 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC37.8■■■■□ 3.64
Lrp6O88572 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.64
Lrp6O88572 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC37.78■■■■□ 3.64
Lrp6O88572 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC37.77■■■■□ 3.64
Lrp6O88572 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC37.75■■■■□ 3.63
Lrp6O88572 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC37.73■■■■□ 3.63
Lrp6O88572 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC37.7■■■■□ 3.63
Lrp6O88572 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC37.61■■■■□ 3.61
Lrp6O88572 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
Lrp6O88572 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC37.55■■■■□ 3.6
Lrp6O88572 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC37.53■■■■□ 3.6
Lrp6O88572 AC166822.3-201ENSMUST00000227394 661 ntBASIC37.53■■■■□ 3.6
Lrp6O88572 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC37.51■■■■□ 3.6
Lrp6O88572 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC37.5■■■■□ 3.59
Lrp6O88572 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC37.47■■■■□ 3.59
Lrp6O88572 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC37.42■■■■□ 3.58
Lrp6O88572 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC37.38■■■■□ 3.57
Lrp6O88572 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC37.37■■■■□ 3.57
Lrp6O88572 Tdp2-203ENSMUST00000223804 1136 ntBASIC37.37■■■■□ 3.57
Lrp6O88572 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC37.37■■■■□ 3.57
Lrp6O88572 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC37.32■■■■□ 3.56
Lrp6O88572 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC37.3■■■■□ 3.56
Lrp6O88572 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC37.29■■■■□ 3.56
Lrp6O88572 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
Lrp6O88572 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
Lrp6O88572 Gm5987-201ENSMUST00000196433 1151 ntBASIC37.26■■■■□ 3.56
Lrp6O88572 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC37.25■■■■□ 3.55
Lrp6O88572 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC37.25■■■■□ 3.55
Lrp6O88572 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC37.24■■■■□ 3.55
Lrp6O88572 Gm16148-201ENSMUST00000119653 893 ntBASIC37.23■■■■□ 3.55
Lrp6O88572 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC37.23■■■■□ 3.55
Lrp6O88572 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC37.21■■■■□ 3.55
Lrp6O88572 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC37.21■■■■□ 3.55
Lrp6O88572 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC37.18■■■■□ 3.54
Lrp6O88572 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
Lrp6O88572 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC37.17■■■■□ 3.54
Lrp6O88572 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC37.17■■■■□ 3.54
Lrp6O88572 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC37.16■■■■□ 3.54
Lrp6O88572 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC37.12■■■■□ 3.53
Lrp6O88572 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC37.07■■■■□ 3.53
Lrp6O88572 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC37.05■■■■□ 3.52
Lrp6O88572 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
Lrp6O88572 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC37■■■■□ 3.51
Lrp6O88572 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC37■■■■□ 3.51
Lrp6O88572 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC36.98■■■■□ 3.51
Lrp6O88572 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC36.94■■■■□ 3.5
Lrp6O88572 AL845457.1-201ENSMUST00000197244 68 ntBASIC36.94■■■■□ 3.5
Lrp6O88572 Gm45855-201ENSMUST00000212546 880 ntBASIC36.93■■■■□ 3.5
Lrp6O88572 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC36.93■■■■□ 3.5
Lrp6O88572 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC36.9■■■■□ 3.5
Lrp6O88572 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
Lrp6O88572 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC36.86■■■■□ 3.49
Lrp6O88572 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC36.86■■■■□ 3.49
Lrp6O88572 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC36.85■■■■□ 3.49
Lrp6O88572 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
Lrp6O88572 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.48
Lrp6O88572 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC36.81■■■■□ 3.48
Lrp6O88572 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
Lrp6O88572 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
Lrp6O88572 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC36.77■■■■□ 3.48
Lrp6O88572 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC36.76■■■■□ 3.48
Lrp6O88572 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
Lrp6O88572 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC36.68■■■■□ 3.46
Lrp6O88572 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
Lrp6O88572 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC36.63■■■■□ 3.45
Lrp6O88572 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC36.61■■■■□ 3.45
Lrp6O88572 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC36.59■■■■□ 3.45
Lrp6O88572 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
Lrp6O88572 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC36.57■■■■□ 3.44
Lrp6O88572 Peli2-204ENSMUST00000226513 1320 ntBASIC36.56■■■■□ 3.44
Lrp6O88572 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
Lrp6O88572 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC36.53■■■■□ 3.44
Lrp6O88572 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
Lrp6O88572 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC36.51■■■■□ 3.43
Lrp6O88572 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC36.5■■■■□ 3.43
Lrp6O88572 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC36.5■■■■□ 3.43
Lrp6O88572 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC36.49■■■■□ 3.43
Lrp6O88572 Gm9397-201ENSMUST00000200125 605 ntBASIC36.49■■■■□ 3.43
Lrp6O88572 Gm42596-201ENSMUST00000196305 1958 ntBASIC36.48■■■■□ 3.43
Lrp6O88572 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms