Protein–RNA interactions for Protein: H3BJZ2

Cdhr4, Cadherin-related family member 4, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr4H3BJZ2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cdhr4H3BJZ2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.58■■□□□ 1.53
Cdhr4H3BJZ2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.58■■□□□ 1.53
Cdhr4H3BJZ2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.57■■□□□ 1.52
Cdhr4H3BJZ2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cdhr4H3BJZ2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.5■■□□□ 1.51
Cdhr4H3BJZ2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
Cdhr4H3BJZ2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cdhr4H3BJZ2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Cdhr4H3BJZ2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Cdhr4H3BJZ2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cdhr4H3BJZ2 Gm17082-201ENSMUST00000166043 1091 ntBASIC24.3■■□□□ 1.48
Cdhr4H3BJZ2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cdhr4H3BJZ2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.27■■□□□ 1.48
Cdhr4H3BJZ2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Cdhr4H3BJZ2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
Cdhr4H3BJZ2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cdhr4H3BJZ2 Gm27322-201ENSMUST00000184007 104 ntBASIC24.19■■□□□ 1.46
Cdhr4H3BJZ2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cdhr4H3BJZ2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.18■■□□□ 1.46
Cdhr4H3BJZ2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Cdhr4H3BJZ2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cdhr4H3BJZ2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cdhr4H3BJZ2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cdhr4H3BJZ2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cdhr4H3BJZ2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.09■■□□□ 1.45
Cdhr4H3BJZ2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cdhr4H3BJZ2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cdhr4H3BJZ2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Cdhr4H3BJZ2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Cdhr4H3BJZ2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cdhr4H3BJZ2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cdhr4H3BJZ2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cdhr4H3BJZ2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.91■■□□□ 1.42
Cdhr4H3BJZ2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.87■■□□□ 1.41
Cdhr4H3BJZ2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Cdhr4H3BJZ2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.84■■□□□ 1.41
Cdhr4H3BJZ2 Gm24804-201ENSMUST00000174982 85 ntBASIC23.84■■□□□ 1.41
Cdhr4H3BJZ2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Cdhr4H3BJZ2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cdhr4H3BJZ2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cdhr4H3BJZ2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cdhr4H3BJZ2 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.79■■□□□ 1.4
Cdhr4H3BJZ2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cdhr4H3BJZ2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Cdhr4H3BJZ2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Cdhr4H3BJZ2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cdhr4H3BJZ2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cdhr4H3BJZ2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cdhr4H3BJZ2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Cdhr4H3BJZ2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cdhr4H3BJZ2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Cdhr4H3BJZ2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cdhr4H3BJZ2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Cdhr4H3BJZ2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Cdhr4H3BJZ2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Cdhr4H3BJZ2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Cdhr4H3BJZ2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Cdhr4H3BJZ2 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.67■■□□□ 1.38
Cdhr4H3BJZ2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Cdhr4H3BJZ2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cdhr4H3BJZ2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.63■■□□□ 1.37
Cdhr4H3BJZ2 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.61■■□□□ 1.37
Cdhr4H3BJZ2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Cdhr4H3BJZ2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Cdhr4H3BJZ2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cdhr4H3BJZ2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Cdhr4H3BJZ2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Cdhr4H3BJZ2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Cdhr4H3BJZ2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Cdhr4H3BJZ2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Cdhr4H3BJZ2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Cdhr4H3BJZ2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Cdhr4H3BJZ2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Cdhr4H3BJZ2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.46■■□□□ 1.35
Cdhr4H3BJZ2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Cdhr4H3BJZ2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Cdhr4H3BJZ2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.44■■□□□ 1.34
Cdhr4H3BJZ2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Cdhr4H3BJZ2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cdhr4H3BJZ2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cdhr4H3BJZ2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cdhr4H3BJZ2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cdhr4H3BJZ2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cdhr4H3BJZ2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cdhr4H3BJZ2 Zfp131-205ENSMUST00000223812 663 ntBASIC23.26■■□□□ 1.31
Cdhr4H3BJZ2 Mipep-204ENSMUST00000225043 1548 ntBASIC23.26■■□□□ 1.31
Cdhr4H3BJZ2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cdhr4H3BJZ2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cdhr4H3BJZ2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cdhr4H3BJZ2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Cdhr4H3BJZ2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Cdhr4H3BJZ2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.2■■□□□ 1.3
Cdhr4H3BJZ2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cdhr4H3BJZ2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cdhr4H3BJZ2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cdhr4H3BJZ2 Gm16148-201ENSMUST00000119653 893 ntBASIC23.16■■□□□ 1.3
Cdhr4H3BJZ2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Cdhr4H3BJZ2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cdhr4H3BJZ2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms