Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.02■■□□□ 1.76
TprF6ZDS4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26■■□□□ 1.75
TprF6ZDS4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.99■■□□□ 1.75
TprF6ZDS4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
TprF6ZDS4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.99■■□□□ 1.75
TprF6ZDS4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
TprF6ZDS4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.97■■□□□ 1.75
TprF6ZDS4 Gm27322-201ENSMUST00000184007 104 ntBASIC25.97■■□□□ 1.75
TprF6ZDS4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
TprF6ZDS4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
TprF6ZDS4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.94■■□□□ 1.74
TprF6ZDS4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TprF6ZDS4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
TprF6ZDS4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TprF6ZDS4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TprF6ZDS4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TprF6ZDS4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.79■■□□□ 1.72
TprF6ZDS4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TprF6ZDS4 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.77■■□□□ 1.72
TprF6ZDS4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TprF6ZDS4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TprF6ZDS4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
TprF6ZDS4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
TprF6ZDS4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TprF6ZDS4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TprF6ZDS4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TprF6ZDS4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.65■■□□□ 1.7
TprF6ZDS4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TprF6ZDS4 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.63■■□□□ 1.69
TprF6ZDS4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TprF6ZDS4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.62■■□□□ 1.69
TprF6ZDS4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TprF6ZDS4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TprF6ZDS4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TprF6ZDS4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TprF6ZDS4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.55■■□□□ 1.68
TprF6ZDS4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.53■■□□□ 1.68
TprF6ZDS4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25.47■■□□□ 1.67
TprF6ZDS4 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.45■■□□□ 1.67
TprF6ZDS4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
TprF6ZDS4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TprF6ZDS4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.42■■□□□ 1.66
TprF6ZDS4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TprF6ZDS4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TprF6ZDS4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TprF6ZDS4 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.37■■□□□ 1.65
TprF6ZDS4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TprF6ZDS4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
TprF6ZDS4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TprF6ZDS4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.33■■□□□ 1.64
TprF6ZDS4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
TprF6ZDS4 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.29■■□□□ 1.64
TprF6ZDS4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TprF6ZDS4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.25■■□□□ 1.63
TprF6ZDS4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TprF6ZDS4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TprF6ZDS4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
TprF6ZDS4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TprF6ZDS4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
TprF6ZDS4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
TprF6ZDS4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.61
TprF6ZDS4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TprF6ZDS4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TprF6ZDS4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
TprF6ZDS4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TprF6ZDS4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
TprF6ZDS4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
TprF6ZDS4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
TprF6ZDS4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TprF6ZDS4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.05■■□□□ 1.6
TprF6ZDS4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
TprF6ZDS4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TprF6ZDS4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TprF6ZDS4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TprF6ZDS4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
TprF6ZDS4 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.94■■□□□ 1.58
TprF6ZDS4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TprF6ZDS4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TprF6ZDS4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
TprF6ZDS4 Gm16148-201ENSMUST00000119653 893 ntBASIC24.92■■□□□ 1.58
TprF6ZDS4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TprF6ZDS4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
TprF6ZDS4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
TprF6ZDS4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
TprF6ZDS4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
TprF6ZDS4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
TprF6ZDS4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.83■■□□□ 1.57
TprF6ZDS4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TprF6ZDS4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
TprF6ZDS4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
TprF6ZDS4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TprF6ZDS4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TprF6ZDS4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TprF6ZDS4 Gm45855-201ENSMUST00000212546 880 ntBASIC24.78■■□□□ 1.56
TprF6ZDS4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
TprF6ZDS4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TprF6ZDS4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TprF6ZDS4 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.76■■□□□ 1.55
TprF6ZDS4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
TprF6ZDS4 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms