Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Ccdc188F6WEU2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
Ccdc188F6WEU2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.94■■■□□ 2.38
Ccdc188F6WEU2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.92■■■□□ 2.38
Ccdc188F6WEU2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Ccdc188F6WEU2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
Ccdc188F6WEU2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC29.82■■■□□ 2.36
Ccdc188F6WEU2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Ccdc188F6WEU2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Ccdc188F6WEU2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Ccdc188F6WEU2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Ccdc188F6WEU2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.65■■■□□ 2.34
Ccdc188F6WEU2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC29.65■■■□□ 2.34
Ccdc188F6WEU2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Ccdc188F6WEU2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Ccdc188F6WEU2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC29.59■■■□□ 2.33
Ccdc188F6WEU2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
Ccdc188F6WEU2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.55■■■□□ 2.32
Ccdc188F6WEU2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Ccdc188F6WEU2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Ccdc188F6WEU2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC29.49■■■□□ 2.31
Ccdc188F6WEU2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC29.49■■■□□ 2.31
Ccdc188F6WEU2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
Ccdc188F6WEU2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC29.47■■■□□ 2.31
Ccdc188F6WEU2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Ccdc188F6WEU2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Ccdc188F6WEU2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.42■■■□□ 2.3
Ccdc188F6WEU2 Gm5987-201ENSMUST00000196433 1151 ntBASIC29.39■■■□□ 2.3
Ccdc188F6WEU2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Ccdc188F6WEU2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Ccdc188F6WEU2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
Ccdc188F6WEU2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
Ccdc188F6WEU2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC29.29■■■□□ 2.28
Ccdc188F6WEU2 Tdp2-203ENSMUST00000223804 1136 ntBASIC29.27■■■□□ 2.28
Ccdc188F6WEU2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Ccdc188F6WEU2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC29.19■■■□□ 2.26
Ccdc188F6WEU2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC29.16■■■□□ 2.26
Ccdc188F6WEU2 AC166822.3-201ENSMUST00000227394 661 ntBASIC29.16■■■□□ 2.26
Ccdc188F6WEU2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Ccdc188F6WEU2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ccdc188F6WEU2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Ccdc188F6WEU2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.12■■■□□ 2.25
Ccdc188F6WEU2 Gm16148-201ENSMUST00000119653 893 ntBASIC29.11■■■□□ 2.25
Ccdc188F6WEU2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC29.05■■■□□ 2.24
Ccdc188F6WEU2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC29.05■■■□□ 2.24
Ccdc188F6WEU2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Ccdc188F6WEU2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Ccdc188F6WEU2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC28.99■■■□□ 2.23
Ccdc188F6WEU2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC28.99■■■□□ 2.23
Ccdc188F6WEU2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Ccdc188F6WEU2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28.98■■■□□ 2.23
Ccdc188F6WEU2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
Ccdc188F6WEU2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
Ccdc188F6WEU2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Ccdc188F6WEU2 Gm45855-201ENSMUST00000212546 880 ntBASIC28.96■■■□□ 2.23
Ccdc188F6WEU2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28.95■■■□□ 2.23
Ccdc188F6WEU2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.22
Ccdc188F6WEU2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Ccdc188F6WEU2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Ccdc188F6WEU2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Ccdc188F6WEU2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
Ccdc188F6WEU2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Ccdc188F6WEU2 Psd-208ENSMUST00000224556 2034 ntBASIC28.87■■■□□ 2.21
Ccdc188F6WEU2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC28.85■■■□□ 2.21
Ccdc188F6WEU2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ccdc188F6WEU2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ccdc188F6WEU2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
Ccdc188F6WEU2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Ccdc188F6WEU2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Ccdc188F6WEU2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
Ccdc188F6WEU2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC28.77■■■□□ 2.2
Ccdc188F6WEU2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC28.76■■■□□ 2.19
Ccdc188F6WEU2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Ccdc188F6WEU2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Ccdc188F6WEU2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Ccdc188F6WEU2 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.7■■■□□ 2.18
Ccdc188F6WEU2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Ccdc188F6WEU2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Ccdc188F6WEU2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
Ccdc188F6WEU2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Ccdc188F6WEU2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Ccdc188F6WEU2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Ccdc188F6WEU2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Ccdc188F6WEU2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Ccdc188F6WEU2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Ccdc188F6WEU2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Ccdc188F6WEU2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Ccdc188F6WEU2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ccdc188F6WEU2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC28.55■■■□□ 2.16
Ccdc188F6WEU2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Ccdc188F6WEU2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
Ccdc188F6WEU2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC28.49■■■□□ 2.15
Ccdc188F6WEU2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Ccdc188F6WEU2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Ccdc188F6WEU2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Ccdc188F6WEU2 Peli2-204ENSMUST00000226513 1320 ntBASIC28.47■■■□□ 2.15
Ccdc188F6WEU2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
Ccdc188F6WEU2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC28.46■■■□□ 2.15
Ccdc188F6WEU2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
Ccdc188F6WEU2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC28.43■■■□□ 2.14
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms