Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.84■■■□□ 2.53
R3hdm1E9Q9Q2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.81■■■□□ 2.52
R3hdm1E9Q9Q2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
R3hdm1E9Q9Q2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.78■■■□□ 2.52
R3hdm1E9Q9Q2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.76■■■□□ 2.52
R3hdm1E9Q9Q2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.76■■■□□ 2.51
R3hdm1E9Q9Q2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
R3hdm1E9Q9Q2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
R3hdm1E9Q9Q2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
R3hdm1E9Q9Q2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
R3hdm1E9Q9Q2 Zfp131-205ENSMUST00000223812 663 ntBASIC30.62■■■□□ 2.49
R3hdm1E9Q9Q2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
R3hdm1E9Q9Q2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
R3hdm1E9Q9Q2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
R3hdm1E9Q9Q2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
R3hdm1E9Q9Q2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.47■■■□□ 2.47
R3hdm1E9Q9Q2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.44■■■□□ 2.46
R3hdm1E9Q9Q2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
R3hdm1E9Q9Q2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
R3hdm1E9Q9Q2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
R3hdm1E9Q9Q2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.45
R3hdm1E9Q9Q2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.37■■■□□ 2.45
R3hdm1E9Q9Q2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30.37■■■□□ 2.45
R3hdm1E9Q9Q2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
R3hdm1E9Q9Q2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
R3hdm1E9Q9Q2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
R3hdm1E9Q9Q2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
R3hdm1E9Q9Q2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.29■■■□□ 2.44
R3hdm1E9Q9Q2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
R3hdm1E9Q9Q2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
R3hdm1E9Q9Q2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.23■■■□□ 2.43
R3hdm1E9Q9Q2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
R3hdm1E9Q9Q2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
R3hdm1E9Q9Q2 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.2■■■□□ 2.42
R3hdm1E9Q9Q2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
R3hdm1E9Q9Q2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.19■■■□□ 2.42
R3hdm1E9Q9Q2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
R3hdm1E9Q9Q2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
R3hdm1E9Q9Q2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
R3hdm1E9Q9Q2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
R3hdm1E9Q9Q2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
R3hdm1E9Q9Q2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
R3hdm1E9Q9Q2 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.05■■■□□ 2.4
R3hdm1E9Q9Q2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
R3hdm1E9Q9Q2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
R3hdm1E9Q9Q2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
R3hdm1E9Q9Q2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
R3hdm1E9Q9Q2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
R3hdm1E9Q9Q2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
R3hdm1E9Q9Q2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
R3hdm1E9Q9Q2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
R3hdm1E9Q9Q2 AC166822.3-201ENSMUST00000227394 661 ntBASIC29.92■■■□□ 2.38
R3hdm1E9Q9Q2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC29.9■■■□□ 2.38
R3hdm1E9Q9Q2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
R3hdm1E9Q9Q2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
R3hdm1E9Q9Q2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
R3hdm1E9Q9Q2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC29.78■■■□□ 2.36
R3hdm1E9Q9Q2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
R3hdm1E9Q9Q2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
R3hdm1E9Q9Q2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
R3hdm1E9Q9Q2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC29.75■■■□□ 2.35
R3hdm1E9Q9Q2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
R3hdm1E9Q9Q2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
R3hdm1E9Q9Q2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
R3hdm1E9Q9Q2 Gm16148-201ENSMUST00000119653 893 ntBASIC29.65■■■□□ 2.34
R3hdm1E9Q9Q2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
R3hdm1E9Q9Q2 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.63■■■□□ 2.33
R3hdm1E9Q9Q2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.63■■■□□ 2.33
R3hdm1E9Q9Q2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC29.62■■■□□ 2.33
R3hdm1E9Q9Q2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC29.62■■■□□ 2.33
R3hdm1E9Q9Q2 Tdp2-203ENSMUST00000223804 1136 ntBASIC29.59■■■□□ 2.33
R3hdm1E9Q9Q2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.59■■■□□ 2.33
R3hdm1E9Q9Q2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
R3hdm1E9Q9Q2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
R3hdm1E9Q9Q2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC29.54■■■□□ 2.32
R3hdm1E9Q9Q2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
R3hdm1E9Q9Q2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC29.52■■■□□ 2.32
R3hdm1E9Q9Q2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
R3hdm1E9Q9Q2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
R3hdm1E9Q9Q2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC29.47■■■□□ 2.31
R3hdm1E9Q9Q2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.46■■■□□ 2.31
R3hdm1E9Q9Q2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
R3hdm1E9Q9Q2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
R3hdm1E9Q9Q2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
R3hdm1E9Q9Q2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
R3hdm1E9Q9Q2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
R3hdm1E9Q9Q2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
R3hdm1E9Q9Q2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
R3hdm1E9Q9Q2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
R3hdm1E9Q9Q2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
R3hdm1E9Q9Q2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
R3hdm1E9Q9Q2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC29.37■■■□□ 2.29
R3hdm1E9Q9Q2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
R3hdm1E9Q9Q2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.36■■■□□ 2.29
R3hdm1E9Q9Q2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC29.35■■■□□ 2.29
R3hdm1E9Q9Q2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC29.33■■■□□ 2.29
R3hdm1E9Q9Q2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
R3hdm1E9Q9Q2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC29.31■■■□□ 2.28
R3hdm1E9Q9Q2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
R3hdm1E9Q9Q2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms