Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmcn1D3YXG0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmcn1D3YXG0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC8.69□□□□□ -1.02
Hmcn1D3YXG0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC8.68□□□□□ -1.02
Hmcn1D3YXG0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hmcn1D3YXG0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Hmcn1D3YXG0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hmcn1D3YXG0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Hmcn1D3YXG0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC8.64□□□□□ -1.03
Hmcn1D3YXG0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC8.64□□□□□ -1.03
Hmcn1D3YXG0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Hmcn1D3YXG0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Hmcn1D3YXG0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Hmcn1D3YXG0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Hmcn1D3YXG0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmcn1D3YXG0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Hmcn1D3YXG0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC8.59□□□□□ -1.03
Hmcn1D3YXG0 Tdp2-203ENSMUST00000223804 1136 ntBASIC8.59□□□□□ -1.03
Hmcn1D3YXG0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Hmcn1D3YXG0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC8.58□□□□□ -1.04
Hmcn1D3YXG0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Hmcn1D3YXG0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hmcn1D3YXG0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hmcn1D3YXG0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Hmcn1D3YXG0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hmcn1D3YXG0 Gm45855-201ENSMUST00000212546 880 ntBASIC8.52□□□□□ -1.05
Hmcn1D3YXG0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Hmcn1D3YXG0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Hmcn1D3YXG0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hmcn1D3YXG0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC8.51□□□□□ -1.05
Hmcn1D3YXG0 Gm16148-201ENSMUST00000119653 893 ntBASIC8.5□□□□□ -1.05
Hmcn1D3YXG0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hmcn1D3YXG0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC8.49□□□□□ -1.05
Hmcn1D3YXG0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Hmcn1D3YXG0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC8.49□□□□□ -1.05
Hmcn1D3YXG0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Hmcn1D3YXG0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Hmcn1D3YXG0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Hmcn1D3YXG0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Hmcn1D3YXG0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Hmcn1D3YXG0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Hmcn1D3YXG0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC8.45□□□□□ -1.06
Hmcn1D3YXG0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
Hmcn1D3YXG0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Hmcn1D3YXG0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Hmcn1D3YXG0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Hmcn1D3YXG0 AC166822.3-201ENSMUST00000227394 661 ntBASIC8.44□□□□□ -1.06
Hmcn1D3YXG0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Hmcn1D3YXG0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Hmcn1D3YXG0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Hmcn1D3YXG0 Gm15039-201ENSMUST00000118914 875 ntBASIC8.42□□□□□ -1.06
Hmcn1D3YXG0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC8.42□□□□□ -1.06
Hmcn1D3YXG0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Hmcn1D3YXG0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC8.41□□□□□ -1.06
Hmcn1D3YXG0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Hmcn1D3YXG0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Hmcn1D3YXG0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC8.4□□□□□ -1.07
Hmcn1D3YXG0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
Hmcn1D3YXG0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hmcn1D3YXG0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hmcn1D3YXG0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hmcn1D3YXG0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hmcn1D3YXG0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Hmcn1D3YXG0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Hmcn1D3YXG0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Hmcn1D3YXG0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Hmcn1D3YXG0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Hmcn1D3YXG0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC8.36□□□□□ -1.07
Hmcn1D3YXG0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Hmcn1D3YXG0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Hmcn1D3YXG0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Hmcn1D3YXG0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
Hmcn1D3YXG0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC8.36□□□□□ -1.07
Hmcn1D3YXG0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Hmcn1D3YXG0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC8.34□□□□□ -1.07
Hmcn1D3YXG0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Hmcn1D3YXG0 Gm9397-201ENSMUST00000200125 605 ntBASIC8.31□□□□□ -1.08
Hmcn1D3YXG0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Hmcn1D3YXG0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Hmcn1D3YXG0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmcn1D3YXG0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Hmcn1D3YXG0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Hmcn1D3YXG0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC8.28□□□□□ -1.08
Hmcn1D3YXG0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Hmcn1D3YXG0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Hmcn1D3YXG0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Hmcn1D3YXG0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Hmcn1D3YXG0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC8.26□□□□□ -1.09
Hmcn1D3YXG0 Gm8503-201ENSMUST00000118131 455 ntBASIC8.26□□□□□ -1.09
Hmcn1D3YXG0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC8.25□□□□□ -1.09
Hmcn1D3YXG0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC8.25□□□□□ -1.09
Hmcn1D3YXG0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmcn1D3YXG0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmcn1D3YXG0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC8.24□□□□□ -1.09
Hmcn1D3YXG0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC8.24□□□□□ -1.09
Hmcn1D3YXG0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Hmcn1D3YXG0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmcn1D3YXG0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmcn1D3YXG0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Hmcn1D3YXG0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms