Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Sh2d4bA6X942 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
Sh2d4bA6X942 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.51■■■□□ 2.32
Sh2d4bA6X942 Gm27322-201ENSMUST00000184007 104 ntBASIC29.5■■■□□ 2.31
Sh2d4bA6X942 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.46■■■□□ 2.31
Sh2d4bA6X942 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
Sh2d4bA6X942 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
Sh2d4bA6X942 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.36■■■□□ 2.29
Sh2d4bA6X942 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29.34■■■□□ 2.29
Sh2d4bA6X942 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Sh2d4bA6X942 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.29■■■□□ 2.28
Sh2d4bA6X942 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
Sh2d4bA6X942 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Sh2d4bA6X942 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
Sh2d4bA6X942 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Sh2d4bA6X942 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Sh2d4bA6X942 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29.19■■■□□ 2.26
Sh2d4bA6X942 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Sh2d4bA6X942 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Sh2d4bA6X942 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Sh2d4bA6X942 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.1■■■□□ 2.25
Sh2d4bA6X942 Zfp131-205ENSMUST00000223812 663 ntBASIC29.09■■■□□ 2.25
Sh2d4bA6X942 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Sh2d4bA6X942 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Sh2d4bA6X942 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Sh2d4bA6X942 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Sh2d4bA6X942 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.96■■■□□ 2.23
Sh2d4bA6X942 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Sh2d4bA6X942 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Sh2d4bA6X942 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Sh2d4bA6X942 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.91■■■□□ 2.22
Sh2d4bA6X942 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.89■■■□□ 2.22
Sh2d4bA6X942 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Sh2d4bA6X942 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Sh2d4bA6X942 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Sh2d4bA6X942 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.83■■■□□ 2.21
Sh2d4bA6X942 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.81■■■□□ 2.2
Sh2d4bA6X942 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.81■■■□□ 2.2
Sh2d4bA6X942 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.77■■■□□ 2.2
Sh2d4bA6X942 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
Sh2d4bA6X942 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.75■■■□□ 2.19
Sh2d4bA6X942 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Sh2d4bA6X942 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Sh2d4bA6X942 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Sh2d4bA6X942 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.7■■■□□ 2.18
Sh2d4bA6X942 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Sh2d4bA6X942 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Sh2d4bA6X942 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.66■■■□□ 2.18
Sh2d4bA6X942 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
Sh2d4bA6X942 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Sh2d4bA6X942 AC166822.3-201ENSMUST00000227394 661 ntBASIC28.61■■■□□ 2.17
Sh2d4bA6X942 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Sh2d4bA6X942 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Sh2d4bA6X942 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Sh2d4bA6X942 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
Sh2d4bA6X942 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Sh2d4bA6X942 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
Sh2d4bA6X942 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Sh2d4bA6X942 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Sh2d4bA6X942 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Sh2d4bA6X942 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Sh2d4bA6X942 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Sh2d4bA6X942 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Sh2d4bA6X942 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Sh2d4bA6X942 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
Sh2d4bA6X942 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Sh2d4bA6X942 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Sh2d4bA6X942 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Sh2d4bA6X942 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
Sh2d4bA6X942 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Sh2d4bA6X942 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC28.38■■■□□ 2.13
Sh2d4bA6X942 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Sh2d4bA6X942 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Sh2d4bA6X942 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Sh2d4bA6X942 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.31■■■□□ 2.12
Sh2d4bA6X942 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Sh2d4bA6X942 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Sh2d4bA6X942 Gm16148-201ENSMUST00000119653 893 ntBASIC28.3■■■□□ 2.12
Sh2d4bA6X942 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.3■■■□□ 2.12
Sh2d4bA6X942 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.28■■■□□ 2.12
Sh2d4bA6X942 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
Sh2d4bA6X942 Tdp2-203ENSMUST00000223804 1136 ntBASIC28.24■■■□□ 2.11
Sh2d4bA6X942 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Sh2d4bA6X942 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Sh2d4bA6X942 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Sh2d4bA6X942 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Sh2d4bA6X942 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Sh2d4bA6X942 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Sh2d4bA6X942 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.15■■■□□ 2.1
Sh2d4bA6X942 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
Sh2d4bA6X942 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Sh2d4bA6X942 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.14■■■□□ 2.09
Sh2d4bA6X942 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC28.1■■■□□ 2.09
Sh2d4bA6X942 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Sh2d4bA6X942 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC28.06■■■□□ 2.08
Sh2d4bA6X942 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Sh2d4bA6X942 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Sh2d4bA6X942 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
Sh2d4bA6X942 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Sh2d4bA6X942 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC28■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms