Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Trav5-1A0A075B5Z7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.09■■□□□ 1.45
Trav5-1A0A075B5Z7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Trav5-1A0A075B5Z7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
Trav5-1A0A075B5Z7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Trav5-1A0A075B5Z7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Trav5-1A0A075B5Z7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.02■■□□□ 1.44
Trav5-1A0A075B5Z7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Trav5-1A0A075B5Z7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Trav5-1A0A075B5Z7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Trav5-1A0A075B5Z7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Trav5-1A0A075B5Z7 Gm26115-201ENSMUST00000175605 87 ntBASIC23.97■■□□□ 1.43
Trav5-1A0A075B5Z7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.95■■□□□ 1.42
Trav5-1A0A075B5Z7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Trav5-1A0A075B5Z7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Trav5-1A0A075B5Z7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Trav5-1A0A075B5Z7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Trav5-1A0A075B5Z7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trav5-1A0A075B5Z7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Trav5-1A0A075B5Z7 Gm8109-201ENSMUST00000194076 746 ntBASIC23.78■■□□□ 1.4
Trav5-1A0A075B5Z7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trav5-1A0A075B5Z7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trav5-1A0A075B5Z7 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.74■■□□□ 1.39
Trav5-1A0A075B5Z7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.72■■□□□ 1.39
Trav5-1A0A075B5Z7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trav5-1A0A075B5Z7 Gm27322-201ENSMUST00000184007 104 ntBASIC23.65■■□□□ 1.38
Trav5-1A0A075B5Z7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
Trav5-1A0A075B5Z7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Trav5-1A0A075B5Z7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Trav5-1A0A075B5Z7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
Trav5-1A0A075B5Z7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trav5-1A0A075B5Z7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Trav5-1A0A075B5Z7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trav5-1A0A075B5Z7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Trav5-1A0A075B5Z7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Trav5-1A0A075B5Z7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.56■■□□□ 1.36
Trav5-1A0A075B5Z7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trav5-1A0A075B5Z7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trav5-1A0A075B5Z7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.52■■□□□ 1.36
Trav5-1A0A075B5Z7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.51■■□□□ 1.35
Trav5-1A0A075B5Z7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Trav5-1A0A075B5Z7 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.46■■□□□ 1.35
Trav5-1A0A075B5Z7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Trav5-1A0A075B5Z7 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.43■■□□□ 1.34
Trav5-1A0A075B5Z7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trav5-1A0A075B5Z7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trav5-1A0A075B5Z7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Trav5-1A0A075B5Z7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.4■■□□□ 1.34
Trav5-1A0A075B5Z7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Trav5-1A0A075B5Z7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trav5-1A0A075B5Z7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trav5-1A0A075B5Z7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trav5-1A0A075B5Z7 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.31■■□□□ 1.32
Trav5-1A0A075B5Z7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Trav5-1A0A075B5Z7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Trav5-1A0A075B5Z7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trav5-1A0A075B5Z7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.27■■□□□ 1.32
Trav5-1A0A075B5Z7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trav5-1A0A075B5Z7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Trav5-1A0A075B5Z7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Trav5-1A0A075B5Z7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trav5-1A0A075B5Z7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trav5-1A0A075B5Z7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trav5-1A0A075B5Z7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.13■■□□□ 1.29
Trav5-1A0A075B5Z7 Gm24804-201ENSMUST00000174982 85 ntBASIC23.11■■□□□ 1.29
Trav5-1A0A075B5Z7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trav5-1A0A075B5Z7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trav5-1A0A075B5Z7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Trav5-1A0A075B5Z7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Trav5-1A0A075B5Z7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trav5-1A0A075B5Z7 Mipep-204ENSMUST00000225043 1548 ntBASIC23.03■■□□□ 1.28
Trav5-1A0A075B5Z7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trav5-1A0A075B5Z7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Trav5-1A0A075B5Z7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22.97■■□□□ 1.27
Trav5-1A0A075B5Z7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trav5-1A0A075B5Z7 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trav5-1A0A075B5Z7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trav5-1A0A075B5Z7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Trav5-1A0A075B5Z7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trav5-1A0A075B5Z7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Trav5-1A0A075B5Z7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Trav5-1A0A075B5Z7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trav5-1A0A075B5Z7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trav5-1A0A075B5Z7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Trav5-1A0A075B5Z7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trav5-1A0A075B5Z7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Trav5-1A0A075B5Z7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Trav5-1A0A075B5Z7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Trav5-1A0A075B5Z7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Trav5-1A0A075B5Z7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Trav5-1A0A075B5Z7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Trav5-1A0A075B5Z7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Trav5-1A0A075B5Z7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Trav5-1A0A075B5Z7 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Trav5-1A0A075B5Z7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Trav5-1A0A075B5Z7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Trav5-1A0A075B5Z7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Trav5-1A0A075B5Z7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Trav5-1A0A075B5Z7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Trav5-1A0A075B5Z7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms