Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Brf2Q3UAW9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Brf2Q3UAW9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Brf2Q3UAW9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Brf2Q3UAW9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Brf2Q3UAW9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Brf2Q3UAW9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Brf2Q3UAW9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.06■□□□□ 0.8
Brf2Q3UAW9 Gm10420-201ENSMUST00000121713 882 ntBASIC20.06■□□□□ 0.8
Brf2Q3UAW9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.06■□□□□ 0.8
Brf2Q3UAW9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.06■□□□□ 0.8
Brf2Q3UAW9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.06■□□□□ 0.8
Brf2Q3UAW9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Brf2Q3UAW9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Brf2Q3UAW9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Brf2Q3UAW9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
Brf2Q3UAW9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Brf2Q3UAW9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Brf2Q3UAW9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Brf2Q3UAW9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Brf2Q3UAW9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Brf2Q3UAW9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Brf2Q3UAW9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Brf2Q3UAW9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Brf2Q3UAW9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Brf2Q3UAW9 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.04■□□□□ 0.8
Brf2Q3UAW9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Brf2Q3UAW9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.04■□□□□ 0.8
Brf2Q3UAW9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Brf2Q3UAW9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Brf2Q3UAW9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
Brf2Q3UAW9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Brf2Q3UAW9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Brf2Q3UAW9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Brf2Q3UAW9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Brf2Q3UAW9 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.02■□□□□ 0.8
Brf2Q3UAW9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Brf2Q3UAW9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Brf2Q3UAW9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Brf2Q3UAW9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Brf2Q3UAW9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Brf2Q3UAW9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Brf2Q3UAW9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Brf2Q3UAW9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Brf2Q3UAW9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Brf2Q3UAW9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Brf2Q3UAW9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Brf2Q3UAW9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Brf2Q3UAW9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Brf2Q3UAW9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Brf2Q3UAW9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Brf2Q3UAW9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.01■□□□□ 0.79
Brf2Q3UAW9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.01■□□□□ 0.79
Brf2Q3UAW9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.01■□□□□ 0.79
Brf2Q3UAW9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Brf2Q3UAW9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20■□□□□ 0.79
Brf2Q3UAW9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Brf2Q3UAW9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Brf2Q3UAW9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Brf2Q3UAW9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Brf2Q3UAW9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Brf2Q3UAW9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Brf2Q3UAW9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.99■□□□□ 0.79
Brf2Q3UAW9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Brf2Q3UAW9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brf2Q3UAW9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brf2Q3UAW9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Brf2Q3UAW9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brf2Q3UAW9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brf2Q3UAW9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brf2Q3UAW9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brf2Q3UAW9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brf2Q3UAW9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Brf2Q3UAW9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Brf2Q3UAW9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Brf2Q3UAW9 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.98■□□□□ 0.79
Brf2Q3UAW9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.98■□□□□ 0.79
Brf2Q3UAW9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.98■□□□□ 0.79
Brf2Q3UAW9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Brf2Q3UAW9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.97■□□□□ 0.79
Brf2Q3UAW9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Brf2Q3UAW9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Brf2Q3UAW9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.97■□□□□ 0.79
Brf2Q3UAW9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Brf2Q3UAW9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Brf2Q3UAW9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Brf2Q3UAW9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Brf2Q3UAW9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Brf2Q3UAW9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Brf2Q3UAW9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.96■□□□□ 0.79
Brf2Q3UAW9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.96■□□□□ 0.79
Brf2Q3UAW9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Brf2Q3UAW9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Brf2Q3UAW9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Brf2Q3UAW9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Brf2Q3UAW9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Brf2Q3UAW9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Brf2Q3UAW9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Brf2Q3UAW9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Brf2Q3UAW9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms