Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdh5P55284 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cdh5P55284 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdh5P55284 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdh5P55284 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdh5P55284 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdh5P55284 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Cdh5P55284 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh5P55284 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh5P55284 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh5P55284 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh5P55284 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh5P55284 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh5P55284 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh5P55284 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh5P55284 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh5P55284 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cdh5P55284 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh5P55284 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdh5P55284 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdh5P55284 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.58■□□□□ 0.88
Cdh5P55284 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdh5P55284 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh5P55284 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Cdh5P55284 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh5P55284 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Cdh5P55284 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh5P55284 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh5P55284 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh5P55284 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh5P55284 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.56■□□□□ 0.88
Cdh5P55284 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh5P55284 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.56■□□□□ 0.88
Cdh5P55284 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh5P55284 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh5P55284 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh5P55284 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.56■□□□□ 0.88
Cdh5P55284 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh5P55284 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Cdh5P55284 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Cdh5P55284 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh5P55284 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh5P55284 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh5P55284 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh5P55284 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Cdh5P55284 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh5P55284 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.54■□□□□ 0.88
Cdh5P55284 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh5P55284 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh5P55284 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh5P55284 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh5P55284 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cdh5P55284 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdh5P55284 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.52■□□□□ 0.88
Cdh5P55284 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.52■□□□□ 0.88
Cdh5P55284 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdh5P55284 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.52■□□□□ 0.88
Cdh5P55284 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Cdh5P55284 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdh5P55284 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Cdh5P55284 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cdh5P55284 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh5P55284 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh5P55284 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh5P55284 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh5P55284 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh5P55284 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh5P55284 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.5■□□□□ 0.87
Cdh5P55284 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh5P55284 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cdh5P55284 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh5P55284 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh5P55284 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh5P55284 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh5P55284 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.49■□□□□ 0.87
Cdh5P55284 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh5P55284 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh5P55284 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh5P55284 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.48■□□□□ 0.87
Cdh5P55284 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh5P55284 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh5P55284 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh5P55284 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh5P55284 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh5P55284 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cdh5P55284 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cdh5P55284 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh5P55284 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.47■□□□□ 0.87
Cdh5P55284 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.47■□□□□ 0.87
Cdh5P55284 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh5P55284 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh5P55284 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
Cdh5P55284 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh5P55284 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh5P55284 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh5P55284 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh5P55284 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh5P55284 Iqck-206ENSMUST00000208658 2891 ntBASIC20.47■□□□□ 0.87
Cdh5P55284 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh5P55284 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms