Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Q8VDP2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Q8VDP2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Q8VDP2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Q8VDP2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Q8VDP2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Q8VDP2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Q8VDP2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Q8VDP2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Q8VDP2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
Q8VDP2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Q8VDP2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Q8VDP2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Q8VDP2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Q8VDP2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Q8VDP2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Q8VDP2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Q8VDP2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Q8VDP2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Q8VDP2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Q8VDP2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.78■□□□□ 0.92
Q8VDP2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Q8VDP2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.78■□□□□ 0.92
Q8VDP2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Q8VDP2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Q8VDP2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Q8VDP2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Q8VDP2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Q8VDP2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q8VDP2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q8VDP2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Q8VDP2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q8VDP2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Q8VDP2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.75■□□□□ 0.91
Q8VDP2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.75■□□□□ 0.91
Q8VDP2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Q8VDP2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.75■□□□□ 0.91
Q8VDP2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Q8VDP2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Q8VDP2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.75■□□□□ 0.91
Q8VDP2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Q8VDP2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Q8VDP2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Q8VDP2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.74■□□□□ 0.91
Q8VDP2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Q8VDP2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Q8VDP2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Q8VDP2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Q8VDP2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Q8VDP2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Q8VDP2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q8VDP2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Q8VDP2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q8VDP2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q8VDP2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Q8VDP2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.72■□□□□ 0.91
Q8VDP2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Q8VDP2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Q8VDP2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Q8VDP2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Q8VDP2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Q8VDP2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Q8VDP2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Q8VDP2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Q8VDP2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q8VDP2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q8VDP2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q8VDP2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q8VDP2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q8VDP2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q8VDP2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q8VDP2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q8VDP2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q8VDP2 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.68■□□□□ 0.9
Q8VDP2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Q8VDP2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Q8VDP2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q8VDP2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.68■□□□□ 0.9
Q8VDP2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q8VDP2 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.68■□□□□ 0.9
Q8VDP2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q8VDP2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q8VDP2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.67■□□□□ 0.9
Q8VDP2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.67■□□□□ 0.9
Q8VDP2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.66■□□□□ 0.9
Q8VDP2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.66■□□□□ 0.9
Q8VDP2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Q8VDP2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Q8VDP2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Q8VDP2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q8VDP2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Q8VDP2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q8VDP2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.65■□□□□ 0.9
Q8VDP2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q8VDP2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Q8VDP2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q8VDP2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Q8VDP2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Q8VDP2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.65■□□□□ 0.9
Q8VDP2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms