Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Upk2P38575 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Upk2P38575 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upk2P38575 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.88■□□□□ 0.61
Upk2P38575 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.88■□□□□ 0.61
Upk2P38575 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.88■□□□□ 0.61
Upk2P38575 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.88■□□□□ 0.61
Upk2P38575 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.88■□□□□ 0.61
Upk2P38575 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Upk2P38575 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upk2P38575 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upk2P38575 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.88■□□□□ 0.61
Upk2P38575 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Upk2P38575 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upk2P38575 Gm10420-201ENSMUST00000121713 882 ntBASIC18.87■□□□□ 0.61
Upk2P38575 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Upk2P38575 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.87■□□□□ 0.61
Upk2P38575 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Upk2P38575 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Upk2P38575 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk2P38575 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk2P38575 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Upk2P38575 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Upk2P38575 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk2P38575 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk2P38575 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk2P38575 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Upk2P38575 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Upk2P38575 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Upk2P38575 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Upk2P38575 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.85■□□□□ 0.61
Upk2P38575 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upk2P38575 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
Upk2P38575 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upk2P38575 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Upk2P38575 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upk2P38575 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Upk2P38575 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Upk2P38575 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upk2P38575 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upk2P38575 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.84■□□□□ 0.61
Upk2P38575 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.83■□□□□ 0.61
Upk2P38575 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Upk2P38575 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Upk2P38575 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Upk2P38575 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Upk2P38575 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.83■□□□□ 0.6
Upk2P38575 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.83■□□□□ 0.6
Upk2P38575 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Upk2P38575 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Upk2P38575 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Upk2P38575 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Upk2P38575 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Upk2P38575 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Upk2P38575 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Upk2P38575 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Upk2P38575 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Upk2P38575 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Upk2P38575 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Upk2P38575 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Upk2P38575 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.82■□□□□ 0.6
Upk2P38575 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Upk2P38575 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.82■□□□□ 0.6
Upk2P38575 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Upk2P38575 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Upk2P38575 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Upk2P38575 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Upk2P38575 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Upk2P38575 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Upk2P38575 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.81■□□□□ 0.6
Upk2P38575 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Upk2P38575 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Upk2P38575 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Upk2P38575 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Upk2P38575 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Upk2P38575 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Upk2P38575 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Upk2P38575 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Upk2P38575 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.8■□□□□ 0.6
Upk2P38575 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.8■□□□□ 0.6
Upk2P38575 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.8■□□□□ 0.6
Upk2P38575 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.79■□□□□ 0.6
Upk2P38575 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.79■□□□□ 0.6
Upk2P38575 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Upk2P38575 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Upk2P38575 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Upk2P38575 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Upk2P38575 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Upk2P38575 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.77■□□□□ 0.6
Upk2P38575 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Upk2P38575 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upk2P38575 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upk2P38575 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Upk2P38575 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upk2P38575 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Upk2P38575 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upk2P38575 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Upk2P38575 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upk2P38575 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.77■□□□□ 0.6
Upk2P38575 Cap2-205ENSMUST00000225824 1634 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms