Protein–RNA interactions for Protein: P38272

SHE3, SWI5-dependent HO expression protein 3, yeastyeast

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE3P38272 YHC3YJL059W 1227 nt5.89□□□□□ -1.47
SHE3P38272 HCR1YLR192C 798 nt5.89□□□□□ -1.47
SHE3P38272 DAL82YNL314W 768 nt5.89□□□□□ -1.47
SHE3P38272 ARG1YOL058W 1263 nt5.89□□□□□ -1.47
SHE3P38272 PIN2YOR104W 849 nt5.89□□□□□ -1.47
SHE3P38272 MLC2YPR188C 492 nt5.89□□□□□ -1.47
SHE3P38272 HXK2YGL253W 1461 nt5.89□□□□□ -1.47
SHE3P38272 GAT1YFL021W 1533 nt5.89□□□□□ -1.47
SHE3P38272 HIS7YBR248C 1659 nt5.88□□□□□ -1.47
SHE3P38272 ARP2YDL029W 1176 nt5.88□□□□□ -1.47
SHE3P38272 SCO2YBR024W 906 nt5.88□□□□□ -1.47
SHE3P38272 YOR300WYOR300W 309 nt5.88□□□□□ -1.47
SHE3P38272 SNZ3YFL059W 897 nt5.87□□□□□ -1.47
SHE3P38272 YGR176WYGR176W 348 nt5.87□□□□□ -1.47
SHE3P38272 ICT1YLR099C 1185 nt5.87□□□□□ -1.47
SHE3P38272 SNZ2YNL333W 897 nt5.87□□□□□ -1.47
SHE3P38272 ERC1YHR032W 1746 nt5.87□□□□□ -1.47
SHE3P38272 CEF1YMR213W 1773 nt5.87□□□□□ -1.47
SHE3P38272 SGV1YPR161C 1974 nt5.87□□□□□ -1.47
SHE3P38272 ALT2YDR111C 1524 nt5.86□□□□□ -1.47
SHE3P38272 YCR097W-AYCR097W-A 267 nt5.86□□□□□ -1.47
SHE3P38272 ATO3YDR384C 828 nt5.86□□□□□ -1.47
SHE3P38272 SEC20YDR498C 1152 nt5.86□□□□□ -1.47
SHE3P38272 YGR127WYGR127W 939 nt5.86□□□□□ -1.47
SHE3P38272 TFS1YLR178C 660 nt5.86□□□□□ -1.47
SHE3P38272 NUD1YOR373W 2556 nt5.86□□□□□ -1.47
SHE3P38272 YGL036WYGL036W 2730 nt5.85□□□□□ -1.47
SHE3P38272 ISC1YER019W 1434 nt5.85□□□□□ -1.47
SHE3P38272 HSX1tR(CCU)J 72 nt5.85□□□□□ -1.47
SHE3P38272 LAG2YOL025W 1983 nt5.84□□□□□ -1.47
SHE3P38272 COX9YDL067C 180 nt5.84□□□□□ -1.47
SHE3P38272 COX26YDR119W-A 201 nt5.84□□□□□ -1.47
SHE3P38272 MLC1YGL106W 450 nt5.84□□□□□ -1.47
SHE3P38272 FZF1YGL254W 900 nt5.84□□□□□ -1.47
SHE3P38272 TAL1YLR354C 1008 nt5.84□□□□□ -1.47
SHE3P38272 VTH1YIL173W 4650 nt5.83□□□□□ -1.48
SHE3P38272 VTH2YJL222W 4650 nt5.83□□□□□ -1.48
SHE3P38272 ACS1YAL054C 2142 nt5.83□□□□□ -1.48
SHE3P38272 VPS4YPR173C 1314 nt5.83□□□□□ -1.48
SHE3P38272 HXT17YNR072W 1695 nt5.83□□□□□ -1.48
SHE3P38272 YFL064CYFL064C 525 nt5.83□□□□□ -1.48
SHE3P38272 THI4YGR144W 981 nt5.83□□□□□ -1.48
SHE3P38272 EFM3YJR129C 1020 nt5.83□□□□□ -1.48
SHE3P38272 CAR1YPL111W 1002 nt5.83□□□□□ -1.48
SHE3P38272 YPR202WYPR202W 717 nt5.83□□□□□ -1.48
SHE3P38272 YIL055CYIL055C 1884 nt5.83□□□□□ -1.48
SHE3P38272 YAP1801YHR161C 1914 nt5.82□□□□□ -1.48
SHE3P38272 GON7YJL184W 372 nt5.82□□□□□ -1.48
SHE3P38272 VMA4YOR332W 702 nt5.82□□□□□ -1.48
SHE3P38272 KNS1YLL019C 2214 nt5.82□□□□□ -1.48
SHE3P38272 YFR006WYFR006W 1608 nt5.81□□□□□ -1.48
SHE3P38272 RTT106YNL206C 1368 nt5.81□□□□□ -1.48
SHE3P38272 YJR115WYJR115W 510 nt5.81□□□□□ -1.48
SHE3P38272 YLL059CYLL059C 507 nt5.81□□□□□ -1.48
SHE3P38272 YLR118CYLR118C 684 nt5.81□□□□□ -1.48
SHE3P38272 YBR230W-AYBR230W-A 201 nt5.81□□□□□ -1.48
SHE3P38272 SMF2YHR050W 1650 nt5.81□□□□□ -1.48
SHE3P38272 YMR155WYMR155W 1644 nt5.81□□□□□ -1.48
SHE3P38272 IMA5YJL216C 1746 nt5.8□□□□□ -1.48
SHE3P38272 MID1YNL291C 1647 nt5.8□□□□□ -1.48
SHE3P38272 BUL1YMR275C 2931 nt5.79□□□□□ -1.48
SHE3P38272 GFA1YKL104C 2154 nt5.79□□□□□ -1.48
SHE3P38272 YDL057WYDL057W 987 nt5.79□□□□□ -1.48
SHE3P38272 CAD1YDR423C 1230 nt5.79□□□□□ -1.48
SHE3P38272 MRPL13YKR006C 795 nt5.79□□□□□ -1.48
SHE3P38272 PGA3YML125C 939 nt5.79□□□□□ -1.48
SHE3P38272 TEA1YOR337W 2280 nt5.79□□□□□ -1.48
SHE3P38272 TIM54YJL054W 1437 nt5.79□□□□□ -1.48
SHE3P38272 TRK2YKR050W 2670 nt5.79□□□□□ -1.48
SHE3P38272 KNH1YDL049C 807 nt5.78□□□□□ -1.48
SHE3P38272 YGR182CYGR182C 354 nt5.78□□□□□ -1.48
SHE3P38272 CIS3YJL158C 684 nt5.78□□□□□ -1.48
SHE3P38272 RAP1YNL216W 2484 nt5.78□□□□□ -1.48
SHE3P38272 PKC1YBL105C 3456 nt5.78□□□□□ -1.48
SHE3P38272 SOG2YOR353C 2376 nt5.78□□□□□ -1.48
SHE3P38272 ATF1YOR377W 1578 nt5.77□□□□□ -1.49
SHE3P38272 VMA16YHR026W 642 nt5.77□□□□□ -1.49
SHE3P38272 YKL151CYKL151C 1014 nt5.77□□□□□ -1.49
SHE3P38272 YOL097W-AYOL097W-A 186 nt5.77□□□□□ -1.49
SHE3P38272 RIO1YOR119C 1455 nt5.77□□□□□ -1.49
SHE3P38272 EHD3YDR036C 1503 nt5.76□□□□□ -1.49
SHE3P38272 YLR194CYLR194C 765 nt5.76□□□□□ -1.49
SHE3P38272 RPS15YOL040C 429 nt5.76□□□□□ -1.49
SHE3P38272 ATP4YPL078C 735 nt5.76□□□□□ -1.49
SHE3P38272 YKR023WYKR023W 1593 nt5.76□□□□□ -1.49
SHE3P38272 ATG22YCL038C 1587 nt5.76□□□□□ -1.49
SHE3P38272 ADE13YLR359W 1449 nt5.75□□□□□ -1.49
SHE3P38272 UGO1YDR470C 1509 nt5.75□□□□□ -1.49
SHE3P38272 YEH1YLL012W 1722 nt5.75□□□□□ -1.49
SHE3P38272 tN(GUU)CtN(GUU)C 74 nt5.75□□□□□ -1.49
SHE3P38272 tN(GUU)FtN(GUU)F 74 nt5.75□□□□□ -1.49
SHE3P38272 tN(GUU)GtN(GUU)G 74 nt5.75□□□□□ -1.49
SHE3P38272 tN(GUU)KtN(GUU)K 74 nt5.75□□□□□ -1.49
SHE3P38272 tN(GUU)LtN(GUU)L 74 nt5.75□□□□□ -1.49
SHE3P38272 tN(GUU)N1tN(GUU)N1 74 nt5.75□□□□□ -1.49
SHE3P38272 tN(GUU)N2tN(GUU)N2 74 nt5.75□□□□□ -1.49
SHE3P38272 tN(GUU)O1tN(GUU)O1 74 nt5.75□□□□□ -1.49
SHE3P38272 tN(GUU)O2tN(GUU)O2 74 nt5.75□□□□□ -1.49
SHE3P38272 tN(GUU)PtN(GUU)P 74 nt5.75□□□□□ -1.49
SHE3P38272 GFD1YMR255W 567 nt5.75□□□□□ -1.49
Retrieved 100 of 7,029 protein–RNA pairs in 34 ms