Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Matn4O89029 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Matn4O89029 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Matn4O89029 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Matn4O89029 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Matn4O89029 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Matn4O89029 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.31■□□□□ 0.84
Matn4O89029 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
Matn4O89029 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Matn4O89029 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Matn4O89029 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Matn4O89029 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Matn4O89029 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Matn4O89029 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.3■□□□□ 0.84
Matn4O89029 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Matn4O89029 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Matn4O89029 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Matn4O89029 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.3■□□□□ 0.84
Matn4O89029 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Matn4O89029 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.29■□□□□ 0.84
Matn4O89029 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Matn4O89029 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Matn4O89029 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.29■□□□□ 0.84
Matn4O89029 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Matn4O89029 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Matn4O89029 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Matn4O89029 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Matn4O89029 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.28■□□□□ 0.84
Matn4O89029 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.28■□□□□ 0.84
Matn4O89029 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Matn4O89029 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Matn4O89029 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Matn4O89029 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Matn4O89029 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Matn4O89029 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Matn4O89029 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Matn4O89029 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Matn4O89029 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Matn4O89029 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Matn4O89029 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Matn4O89029 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Matn4O89029 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Matn4O89029 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Matn4O89029 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.26■□□□□ 0.83
Matn4O89029 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Matn4O89029 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Matn4O89029 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Matn4O89029 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Matn4O89029 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Matn4O89029 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Matn4O89029 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Matn4O89029 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.25■□□□□ 0.83
Matn4O89029 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Matn4O89029 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Matn4O89029 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Matn4O89029 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Matn4O89029 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Matn4O89029 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Matn4O89029 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Matn4O89029 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Matn4O89029 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Matn4O89029 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Matn4O89029 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
Matn4O89029 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.22■□□□□ 0.83
Matn4O89029 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Matn4O89029 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Matn4O89029 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Matn4O89029 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Matn4O89029 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Matn4O89029 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Matn4O89029 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Matn4O89029 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Matn4O89029 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Matn4O89029 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Matn4O89029 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Matn4O89029 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Matn4O89029 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Matn4O89029 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Matn4O89029 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Matn4O89029 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.2■□□□□ 0.82
Matn4O89029 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Matn4O89029 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Matn4O89029 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.2■□□□□ 0.82
Matn4O89029 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Matn4O89029 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
Matn4O89029 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Matn4O89029 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Matn4O89029 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Matn4O89029 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Matn4O89029 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Matn4O89029 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Matn4O89029 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Matn4O89029 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.18■□□□□ 0.82
Matn4O89029 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Matn4O89029 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Matn4O89029 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Matn4O89029 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.18■□□□□ 0.82
Matn4O89029 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.18■□□□□ 0.82
Matn4O89029 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Matn4O89029 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms