Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 ELA1YNL230C 1140 nt5.33□□□□□ -1.56
CUP9P41817 MRPL1YDR116C 858 nt5.32□□□□□ -1.56
CUP9P41817 PHB1YGR132C 864 nt5.32□□□□□ -1.56
CUP9P41817 NMT1YLR195C 1368 nt5.31□□□□□ -1.56
CUP9P41817 SLX5YDL013W 1860 nt5.31□□□□□ -1.56
CUP9P41817 GPI11YDR302W 660 nt5.31□□□□□ -1.56
CUP9P41817 CIS3YJL158C 684 nt5.31□□□□□ -1.56
CUP9P41817 IMA5YJL216C 1746 nt5.31□□□□□ -1.56
CUP9P41817 YGR022CYGR022C 330 nt5.3□□□□□ -1.56
CUP9P41817 CEF1YMR213W 1773 nt5.29□□□□□ -1.56
CUP9P41817 FRS2YFL022C 1512 nt5.29□□□□□ -1.56
CUP9P41817 CNE1YAL058W 1509 nt5.29□□□□□ -1.56
CUP9P41817 PAN6YIL145C 930 nt5.29□□□□□ -1.56
CUP9P41817 RPS9AYPL081W 594 nt5.29□□□□□ -1.56
CUP9P41817 POP1YNL221C 2628 nt5.29□□□□□ -1.56
CUP9P41817 IME2YJL106W 1938 nt5.29□□□□□ -1.56
CUP9P41817 RAP1YNL216W 2484 nt5.29□□□□□ -1.56
CUP9P41817 YNR075C-AYNR075C-A 93 nt5.28□□□□□ -1.56
CUP9P41817 TEP1YNL128W 1305 nt5.27□□□□□ -1.57
CUP9P41817 YCR047W-AYCR047W-A 207 nt5.27□□□□□ -1.57
CUP9P41817 YGR127WYGR127W 939 nt5.27□□□□□ -1.57
CUP9P41817 YML083CYML083C 1257 nt5.27□□□□□ -1.57
CUP9P41817 RPN7YPR108W 1290 nt5.27□□□□□ -1.57
CUP9P41817 IFA38YBR159W 1044 nt5.27□□□□□ -1.57
CUP9P41817 CYC8YBR112C 2901 nt5.27□□□□□ -1.57
CUP9P41817 PET112YBL080C 1626 nt5.26□□□□□ -1.57
CUP9P41817 HXK2YGL253W 1461 nt5.26□□□□□ -1.57
CUP9P41817 YOL036WYOL036W 2286 nt5.26□□□□□ -1.57
CUP9P41817 YCL065WYCL065W 369 nt5.26□□□□□ -1.57
CUP9P41817 MRP17YKL003C 396 nt5.26□□□□□ -1.57
CUP9P41817 YML6YML025C 861 nt5.26□□□□□ -1.57
CUP9P41817 ARA2YMR041C 1008 nt5.26□□□□□ -1.57
CUP9P41817 ALT2YDR111C 1524 nt5.26□□□□□ -1.57
CUP9P41817 GLE1YDL207W 1617 nt5.26□□□□□ -1.57
CUP9P41817 RIO1YOR119C 1455 nt5.26□□□□□ -1.57
CUP9P41817 YHL017WYHL017W 1599 nt5.25□□□□□ -1.57
CUP9P41817 RRP4YHR069C 1080 nt5.25□□□□□ -1.57
CUP9P41817 ICT1YLR099C 1185 nt5.25□□□□□ -1.57
CUP9P41817 YNR040WYNR040W 771 nt5.25□□□□□ -1.57
CUP9P41817 VRP1YLR337C 2454 nt5.25□□□□□ -1.57
CUP9P41817 APE3YBR286W 1614 nt5.25□□□□□ -1.57
CUP9P41817 PRP24YMR268C 1335 nt5.24□□□□□ -1.57
CUP9P41817 YIL055CYIL055C 1884 nt5.24□□□□□ -1.57
CUP9P41817 YRA1YDR381W 681 nt5.24□□□□□ -1.57
CUP9P41817 EFM4YIL064W 774 nt5.24□□□□□ -1.57
CUP9P41817 YRF1-4YLR466W 4149 nt5.24□□□□□ -1.57
CUP9P41817 AMD1YML035C 2433 nt5.24□□□□□ -1.57
CUP9P41817 MCM3YEL032W 2916 nt5.24□□□□□ -1.57
CUP9P41817 YDL114WYDL114W 927 nt5.23□□□□□ -1.57
CUP9P41817 PPM1YDR435C 987 nt5.23□□□□□ -1.57
CUP9P41817 SUP2tY(GUA)D 75 nt5.23□□□□□ -1.57
CUP9P41817 SUP11tY(GUA)F1 75 nt5.23□□□□□ -1.57
CUP9P41817 SUP6tY(GUA)F2 75 nt5.23□□□□□ -1.57
CUP9P41817 SUP7tY(GUA)J1 75 nt5.23□□□□□ -1.57
CUP9P41817 SUP4tY(GUA)J2 75 nt5.23□□□□□ -1.57
CUP9P41817 SUP5tY(GUA)M1 75 nt5.23□□□□□ -1.57
CUP9P41817 SUP8tY(GUA)M2 75 nt5.23□□□□□ -1.57
CUP9P41817 DJP1YIR004W 1299 nt5.23□□□□□ -1.57
CUP9P41817 SUP3tY(GUA)O 75 nt5.23□□□□□ -1.57
CUP9P41817 DAL3YIR032C 588 nt5.23□□□□□ -1.57
CUP9P41817 EFM3YJR129C 1020 nt5.23□□□□□ -1.57
CUP9P41817 YKL031WYKL031W 414 nt5.23□□□□□ -1.57
CUP9P41817 MRPL36YBR122C 534 nt5.23□□□□□ -1.57
CUP9P41817 HXT15YDL245C 1704 nt5.23□□□□□ -1.57
CUP9P41817 HXT16YJR158W 1704 nt5.23□□□□□ -1.57
CUP9P41817 GIT1YCR098C 1557 nt5.22□□□□□ -1.57
CUP9P41817 ADY2YCR010C 852 nt5.22□□□□□ -1.57
CUP9P41817 COX9YDL067C 180 nt5.22□□□□□ -1.57
CUP9P41817 YDR109CYDR109C 2148 nt5.22□□□□□ -1.57
CUP9P41817 YDR154CYDR154C 351 nt5.22□□□□□ -1.57
CUP9P41817 YEA6YEL006W 1008 nt5.22□□□□□ -1.57
CUP9P41817 THI4YGR144W 981 nt5.22□□□□□ -1.57
CUP9P41817 LST8YNL006W 912 nt5.22□□□□□ -1.57
CUP9P41817 YBL070CYBL070C 321 nt5.22□□□□□ -1.57
CUP9P41817 ARR3YPR201W 1215 nt5.22□□□□□ -1.57
CUP9P41817 YDR514CYDR514C 1452 nt5.21□□□□□ -1.58
CUP9P41817 PGK1YCR012W 1251 nt5.21□□□□□ -1.58
CUP9P41817 HAP2YGL237C 798 nt5.21□□□□□ -1.58
CUP9P41817 SYN8YAL014C 768 nt5.21□□□□□ -1.58
CUP9P41817 YOL163WYOL163W 510 nt5.21□□□□□ -1.58
CUP9P41817 LAG2YOL025W 1983 nt5.21□□□□□ -1.58
CUP9P41817 MKK1YOR231W 1527 nt5.2□□□□□ -1.58
CUP9P41817 LYS12YIL094C 1116 nt5.2□□□□□ -1.58
CUP9P41817 DCN1YLR128W 810 nt5.2□□□□□ -1.58
CUP9P41817 YPR123CYPR123C 435 nt5.2□□□□□ -1.58
CUP9P41817 STB5YHR178W 2232 nt5.19□□□□□ -1.58
CUP9P41817 EFT2YDR385W 2529 nt5.19□□□□□ -1.58
CUP9P41817 EFT1YOR133W 2529 nt5.19□□□□□ -1.58
CUP9P41817 GON7YJL184W 372 nt5.19□□□□□ -1.58
CUP9P41817 ARG1YOL058W 1263 nt5.19□□□□□ -1.58
CUP9P41817 SHM1YBR263W 1473 nt5.19□□□□□ -1.58
CUP9P41817 MNN5YJL186W 1761 nt5.19□□□□□ -1.58
CUP9P41817 ACS1YAL054C 2142 nt5.18□□□□□ -1.58
CUP9P41817 GIR2YDR152W 798 nt5.18□□□□□ -1.58
CUP9P41817 YBR124WYBR124W 360 nt5.18□□□□□ -1.58
CUP9P41817 RGD1YBR260C 2001 nt5.18□□□□□ -1.58
CUP9P41817 RAD3YER171W 2337 nt5.17□□□□□ -1.58
CUP9P41817 ARP2YDL029W 1176 nt5.17□□□□□ -1.58
CUP9P41817 MRS1YIR021W 1092 nt5.17□□□□□ -1.58
CUP9P41817 APS3YJL024C 585 nt5.17□□□□□ -1.58
Retrieved 100 of 7,029 protein–RNA pairs in 152.5 ms