Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hbb-b1P02088 Iqck-206ENSMUST00000208658 2891 ntBASIC15.3■□□□□ 0.04
Hbb-b1P02088 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Hbb-b1P02088 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hbb-b1P02088 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hbb-b1P02088 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hbb-b1P02088 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hbb-b1P02088 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hbb-b1P02088 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hbb-b1P02088 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hbb-b1P02088 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hbb-b1P02088 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.29■□□□□ 0.04
Hbb-b1P02088 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hbb-b1P02088 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hbb-b1P02088 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hbb-b1P02088 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hbb-b1P02088 Gm14121-201ENSMUST00000121441 1380 ntBASIC15.28■□□□□ 0.04
Hbb-b1P02088 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hbb-b1P02088 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Hbb-b1P02088 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hbb-b1P02088 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Hbb-b1P02088 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Hbb-b1P02088 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hbb-b1P02088 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hbb-b1P02088 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hbb-b1P02088 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
Hbb-b1P02088 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hbb-b1P02088 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hbb-b1P02088 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hbb-b1P02088 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hbb-b1P02088 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Hbb-b1P02088 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hbb-b1P02088 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hbb-b1P02088 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hbb-b1P02088 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hbb-b1P02088 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hbb-b1P02088 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hbb-b1P02088 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hbb-b1P02088 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hbb-b1P02088 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hbb-b1P02088 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC15.25■□□□□ 0.03
Hbb-b1P02088 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hbb-b1P02088 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hbb-b1P02088 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hbb-b1P02088 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hbb-b1P02088 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hbb-b1P02088 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hbb-b1P02088 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hbb-b1P02088 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.25■□□□□ 0.03
Hbb-b1P02088 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Hbb-b1P02088 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hbb-b1P02088 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Hbb-b1P02088 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Hbb-b1P02088 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hbb-b1P02088 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hbb-b1P02088 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hbb-b1P02088 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hbb-b1P02088 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Hbb-b1P02088 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hbb-b1P02088 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Hbb-b1P02088 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.23■□□□□ 0.03
Hbb-b1P02088 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Hbb-b1P02088 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
Hbb-b1P02088 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hbb-b1P02088 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hbb-b1P02088 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hbb-b1P02088 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hbb-b1P02088 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hbb-b1P02088 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hbb-b1P02088 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hbb-b1P02088 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hbb-b1P02088 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hbb-b1P02088 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hbb-b1P02088 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hbb-b1P02088 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hbb-b1P02088 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hbb-b1P02088 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hbb-b1P02088 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hbb-b1P02088 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hbb-b1P02088 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.21■□□□□ 0.03
Hbb-b1P02088 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hbb-b1P02088 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.21■□□□□ 0.03
Hbb-b1P02088 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Hbb-b1P02088 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hbb-b1P02088 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hbb-b1P02088 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hbb-b1P02088 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hbb-b1P02088 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Hbb-b1P02088 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Hbb-b1P02088 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hbb-b1P02088 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Hbb-b1P02088 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Hbb-b1P02088 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hbb-b1P02088 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Hbb-b1P02088 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hbb-b1P02088 Gm26115-201ENSMUST00000175605 87 ntBASIC15.19■□□□□ 0.02
Hbb-b1P02088 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hbb-b1P02088 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hbb-b1P02088 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hbb-b1P02088 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 1695.8 ms