Protein–RNA interactions for Protein: Q9JJA7

Ccnl2, Cyclin-L2, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnl2Q9JJA7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccnl2Q9JJA7 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccnl2Q9JJA7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccnl2Q9JJA7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccnl2Q9JJA7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.28■□□□□ 0.68
Ccnl2Q9JJA7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.28■□□□□ 0.68
Ccnl2Q9JJA7 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccnl2Q9JJA7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Ccnl2Q9JJA7 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccnl2Q9JJA7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ccnl2Q9JJA7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccnl2Q9JJA7 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccnl2Q9JJA7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccnl2Q9JJA7 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.26■□□□□ 0.67
Ccnl2Q9JJA7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccnl2Q9JJA7 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccnl2Q9JJA7 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccnl2Q9JJA7 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccnl2Q9JJA7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.25■□□□□ 0.67
Ccnl2Q9JJA7 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Ccnl2Q9JJA7 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccnl2Q9JJA7 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccnl2Q9JJA7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.24■□□□□ 0.67
Ccnl2Q9JJA7 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccnl2Q9JJA7 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccnl2Q9JJA7 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccnl2Q9JJA7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccnl2Q9JJA7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ccnl2Q9JJA7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccnl2Q9JJA7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccnl2Q9JJA7 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccnl2Q9JJA7 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.22■□□□□ 0.67
Ccnl2Q9JJA7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccnl2Q9JJA7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccnl2Q9JJA7 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccnl2Q9JJA7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ccnl2Q9JJA7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccnl2Q9JJA7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccnl2Q9JJA7 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccnl2Q9JJA7 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ccnl2Q9JJA7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccnl2Q9JJA7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.21■□□□□ 0.67
Ccnl2Q9JJA7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccnl2Q9JJA7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccnl2Q9JJA7 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccnl2Q9JJA7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccnl2Q9JJA7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Ccnl2Q9JJA7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccnl2Q9JJA7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccnl2Q9JJA7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccnl2Q9JJA7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccnl2Q9JJA7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ccnl2Q9JJA7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccnl2Q9JJA7 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.2■□□□□ 0.66
Ccnl2Q9JJA7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccnl2Q9JJA7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccnl2Q9JJA7 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccnl2Q9JJA7 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccnl2Q9JJA7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ccnl2Q9JJA7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccnl2Q9JJA7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccnl2Q9JJA7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ccnl2Q9JJA7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.19■□□□□ 0.66
Ccnl2Q9JJA7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccnl2Q9JJA7 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccnl2Q9JJA7 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ccnl2Q9JJA7 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccnl2Q9JJA7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccnl2Q9JJA7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccnl2Q9JJA7 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccnl2Q9JJA7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccnl2Q9JJA7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Ccnl2Q9JJA7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccnl2Q9JJA7 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccnl2Q9JJA7 Gm10420-201ENSMUST00000121713 882 ntBASIC19.17■□□□□ 0.66
Ccnl2Q9JJA7 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccnl2Q9JJA7 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccnl2Q9JJA7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccnl2Q9JJA7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ccnl2Q9JJA7 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ccnl2Q9JJA7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccnl2Q9JJA7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccnl2Q9JJA7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.16■□□□□ 0.66
Ccnl2Q9JJA7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccnl2Q9JJA7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccnl2Q9JJA7 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccnl2Q9JJA7 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccnl2Q9JJA7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccnl2Q9JJA7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.15■□□□□ 0.66
Ccnl2Q9JJA7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccnl2Q9JJA7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccnl2Q9JJA7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccnl2Q9JJA7 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.15■□□□□ 0.66
Ccnl2Q9JJA7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccnl2Q9JJA7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccnl2Q9JJA7 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccnl2Q9JJA7 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccnl2Q9JJA7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccnl2Q9JJA7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccnl2Q9JJA7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms