Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scrt1Q99M85 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scrt1Q99M85 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.04■□□□□ 0.64
Scrt1Q99M85 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scrt1Q99M85 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scrt1Q99M85 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scrt1Q99M85 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.04■□□□□ 0.64
Scrt1Q99M85 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scrt1Q99M85 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scrt1Q99M85 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.03■□□□□ 0.64
Scrt1Q99M85 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.03■□□□□ 0.64
Scrt1Q99M85 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Scrt1Q99M85 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scrt1Q99M85 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Scrt1Q99M85 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scrt1Q99M85 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scrt1Q99M85 Serp2-204ENSMUST00000228055 705 ntBASIC19.03■□□□□ 0.64
Scrt1Q99M85 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scrt1Q99M85 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scrt1Q99M85 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Scrt1Q99M85 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Scrt1Q99M85 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Scrt1Q99M85 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Scrt1Q99M85 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scrt1Q99M85 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scrt1Q99M85 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scrt1Q99M85 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Scrt1Q99M85 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scrt1Q99M85 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Scrt1Q99M85 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.01■□□□□ 0.63
Scrt1Q99M85 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scrt1Q99M85 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Scrt1Q99M85 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.01■□□□□ 0.63
Scrt1Q99M85 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scrt1Q99M85 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scrt1Q99M85 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Scrt1Q99M85 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19■□□□□ 0.63
Scrt1Q99M85 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scrt1Q99M85 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scrt1Q99M85 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Scrt1Q99M85 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scrt1Q99M85 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scrt1Q99M85 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scrt1Q99M85 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scrt1Q99M85 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scrt1Q99M85 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Scrt1Q99M85 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scrt1Q99M85 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scrt1Q99M85 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scrt1Q99M85 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scrt1Q99M85 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scrt1Q99M85 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scrt1Q99M85 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scrt1Q99M85 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scrt1Q99M85 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.98■□□□□ 0.63
Scrt1Q99M85 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scrt1Q99M85 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scrt1Q99M85 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scrt1Q99M85 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scrt1Q99M85 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scrt1Q99M85 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scrt1Q99M85 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.97■□□□□ 0.63
Scrt1Q99M85 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.97■□□□□ 0.63
Scrt1Q99M85 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Scrt1Q99M85 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.96■□□□□ 0.63
Scrt1Q99M85 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scrt1Q99M85 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scrt1Q99M85 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scrt1Q99M85 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.95■□□□□ 0.62
Scrt1Q99M85 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.95■□□□□ 0.62
Scrt1Q99M85 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Scrt1Q99M85 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scrt1Q99M85 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Scrt1Q99M85 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Scrt1Q99M85 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Scrt1Q99M85 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Scrt1Q99M85 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scrt1Q99M85 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scrt1Q99M85 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.93■□□□□ 0.62
Scrt1Q99M85 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Scrt1Q99M85 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.93■□□□□ 0.62
Scrt1Q99M85 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scrt1Q99M85 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scrt1Q99M85 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scrt1Q99M85 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scrt1Q99M85 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scrt1Q99M85 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scrt1Q99M85 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scrt1Q99M85 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scrt1Q99M85 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scrt1Q99M85 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scrt1Q99M85 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Scrt1Q99M85 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scrt1Q99M85 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Scrt1Q99M85 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scrt1Q99M85 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scrt1Q99M85 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scrt1Q99M85 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scrt1Q99M85 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.91■□□□□ 0.62
Scrt1Q99M85 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms