Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav7d-3Q5R1I1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC15.89■□□□□ 0.13
Trav7d-3Q5R1I1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7d-3Q5R1I1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7d-3Q5R1I1 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.88■□□□□ 0.13
Trav7d-3Q5R1I1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC15.88■□□□□ 0.13
Trav7d-3Q5R1I1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7d-3Q5R1I1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7d-3Q5R1I1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7d-3Q5R1I1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7d-3Q5R1I1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7d-3Q5R1I1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav7d-3Q5R1I1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav7d-3Q5R1I1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav7d-3Q5R1I1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trav7d-3Q5R1I1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7d-3Q5R1I1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7d-3Q5R1I1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7d-3Q5R1I1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7d-3Q5R1I1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC15.86■□□□□ 0.13
Trav7d-3Q5R1I1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7d-3Q5R1I1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7d-3Q5R1I1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7d-3Q5R1I1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7d-3Q5R1I1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav7d-3Q5R1I1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav7d-3Q5R1I1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav7d-3Q5R1I1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav7d-3Q5R1I1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC15.85■□□□□ 0.13
Trav7d-3Q5R1I1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav7d-3Q5R1I1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav7d-3Q5R1I1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trav7d-3Q5R1I1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav7d-3Q5R1I1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav7d-3Q5R1I1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav7d-3Q5R1I1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav7d-3Q5R1I1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav7d-3Q5R1I1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC15.84■□□□□ 0.13
Trav7d-3Q5R1I1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav7d-3Q5R1I1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav7d-3Q5R1I1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav7d-3Q5R1I1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav7d-3Q5R1I1 Gm22567-201ENSMUST00000175542 342 ntBASIC15.84■□□□□ 0.13
Trav7d-3Q5R1I1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav7d-3Q5R1I1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav7d-3Q5R1I1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav7d-3Q5R1I1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Trav7d-3Q5R1I1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav7d-3Q5R1I1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trav7d-3Q5R1I1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav7d-3Q5R1I1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trav7d-3Q5R1I1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav7d-3Q5R1I1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav7d-3Q5R1I1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav7d-3Q5R1I1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trav7d-3Q5R1I1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav7d-3Q5R1I1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav7d-3Q5R1I1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.82■□□□□ 0.12
Trav7d-3Q5R1I1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav7d-3Q5R1I1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav7d-3Q5R1I1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav7d-3Q5R1I1 Gm6311-201ENSMUST00000073790 878 ntBASIC15.82■□□□□ 0.12
Trav7d-3Q5R1I1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav7d-3Q5R1I1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trav7d-3Q5R1I1 Gm9910-201ENSMUST00000195385 1550 ntBASIC15.82■□□□□ 0.12
Trav7d-3Q5R1I1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav7d-3Q5R1I1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7d-3Q5R1I1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7d-3Q5R1I1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7d-3Q5R1I1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7d-3Q5R1I1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7d-3Q5R1I1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7d-3Q5R1I1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav7d-3Q5R1I1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7d-3Q5R1I1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7d-3Q5R1I1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7d-3Q5R1I1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7d-3Q5R1I1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7d-3Q5R1I1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav7d-3Q5R1I1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav7d-3Q5R1I1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav7d-3Q5R1I1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav7d-3Q5R1I1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav7d-3Q5R1I1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav7d-3Q5R1I1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC15.8■□□□□ 0.12
Trav7d-3Q5R1I1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav7d-3Q5R1I1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7d-3Q5R1I1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav7d-3Q5R1I1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav7d-3Q5R1I1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7d-3Q5R1I1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trav7d-3Q5R1I1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7d-3Q5R1I1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trav7d-3Q5R1I1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7d-3Q5R1I1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7d-3Q5R1I1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7d-3Q5R1I1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7d-3Q5R1I1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7d-3Q5R1I1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC15.78■□□□□ 0.12
Trav7d-3Q5R1I1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms