Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pfn1P62962 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pfn1P62962 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Pfn1P62962 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pfn1P62962 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pfn1P62962 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Pfn1P62962 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pfn1P62962 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.86■□□□□ 0.29
Pfn1P62962 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pfn1P62962 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pfn1P62962 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pfn1P62962 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pfn1P62962 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.85■□□□□ 0.29
Pfn1P62962 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC16.85■□□□□ 0.29
Pfn1P62962 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pfn1P62962 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Pfn1P62962 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Pfn1P62962 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pfn1P62962 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Pfn1P62962 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pfn1P62962 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pfn1P62962 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pfn1P62962 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Pfn1P62962 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pfn1P62962 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pfn1P62962 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pfn1P62962 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pfn1P62962 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pfn1P62962 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pfn1P62962 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Pfn1P62962 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfn1P62962 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.82■□□□□ 0.28
Pfn1P62962 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pfn1P62962 Gm4419-202ENSMUST00000226239 1431 ntBASIC16.82■□□□□ 0.28
Pfn1P62962 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfn1P62962 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pfn1P62962 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfn1P62962 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfn1P62962 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC16.82■□□□□ 0.28
Pfn1P62962 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfn1P62962 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfn1P62962 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfn1P62962 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfn1P62962 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pfn1P62962 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pfn1P62962 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pfn1P62962 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pfn1P62962 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pfn1P62962 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pfn1P62962 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pfn1P62962 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pfn1P62962 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pfn1P62962 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Pfn1P62962 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.8■□□□□ 0.28
Pfn1P62962 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pfn1P62962 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pfn1P62962 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pfn1P62962 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pfn1P62962 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pfn1P62962 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pfn1P62962 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pfn1P62962 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pfn1P62962 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pfn1P62962 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pfn1P62962 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pfn1P62962 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.78■□□□□ 0.28
Pfn1P62962 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pfn1P62962 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pfn1P62962 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pfn1P62962 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pfn1P62962 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pfn1P62962 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pfn1P62962 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pfn1P62962 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Pfn1P62962 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
Pfn1P62962 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pfn1P62962 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pfn1P62962 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pfn1P62962 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pfn1P62962 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pfn1P62962 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pfn1P62962 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pfn1P62962 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pfn1P62962 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pfn1P62962 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pfn1P62962 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pfn1P62962 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Pfn1P62962 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pfn1P62962 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pfn1P62962 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.76■□□□□ 0.27
Pfn1P62962 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pfn1P62962 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pfn1P62962 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Pfn1P62962 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pfn1P62962 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.75■□□□□ 0.27
Pfn1P62962 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pfn1P62962 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pfn1P62962 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pfn1P62962 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pfn1P62962 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms