Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 YMR253CYMR253C 1245 nt7.24□□□□□ -1.25
RPT4P53549 YHR131CYHR131C 2553 nt7.24□□□□□ -1.25
RPT4P53549 CCC2YDR270W 3015 nt7.24□□□□□ -1.25
RPT4P53549 YKR032WYKR032W 315 nt7.23□□□□□ -1.25
RPT4P53549 SSP120YLR250W 705 nt7.23□□□□□ -1.25
RPT4P53549 YNL042W-BYNL042W-B 258 nt7.23□□□□□ -1.25
RPT4P53549 YNL190WYNL190W 615 nt7.23□□□□□ -1.25
RPT4P53549 ELA1YNL230C 1140 nt7.23□□□□□ -1.25
RPT4P53549 GUT1YHL032C 2130 nt7.22□□□□□ -1.25
RPT4P53549 YDL022C-AYDL022C-A 249 nt7.22□□□□□ -1.25
RPT4P53549 CDC34YDR054C 888 nt7.22□□□□□ -1.25
RPT4P53549 NTG1YAL015C 1200 nt7.22□□□□□ -1.25
RPT4P53549 RPL5YPL131W 894 nt7.22□□□□□ -1.25
RPT4P53549 RPE1YJL121C 717 nt7.21□□□□□ -1.26
RPT4P53549 POB3YML069W 1659 nt7.21□□□□□ -1.26
RPT4P53549 CDC19YAL038W 1503 nt7.21□□□□□ -1.26
RPT4P53549 COR1YBL045C 1374 nt7.2□□□□□ -1.26
RPT4P53549 YDR034W-BYDR034W-B 156 nt7.2□□□□□ -1.26
RPT4P53549 COX20YDR231C 618 nt7.2□□□□□ -1.26
RPT4P53549 LDS1YAL018C 978 nt7.2□□□□□ -1.26
RPT4P53549 RPL10YLR075W 666 nt7.2□□□□□ -1.26
RPT4P53549 YLR123CYLR123C 330 nt7.2□□□□□ -1.26
RPT4P53549 PEX13YLR191W 1161 nt7.2□□□□□ -1.26
RPT4P53549 RRS1YOR294W 612 nt7.2□□□□□ -1.26
RPT4P53549 MDM31YHR194W 1740 nt7.19□□□□□ -1.26
RPT4P53549 YML012C-AYML012C-A 378 nt7.19□□□□□ -1.26
RPT4P53549 RKI1YOR095C 777 nt7.19□□□□□ -1.26
RPT4P53549 KTR1YOR099W 1182 nt7.19□□□□□ -1.26
RPT4P53549 FRT1YOR324C 1809 nt7.19□□□□□ -1.26
RPT4P53549 RSC30YHR056C 2652 nt7.19□□□□□ -1.26
RPT4P53549 YJL045WYJL045W 1905 nt7.19□□□□□ -1.26
RPT4P53549 LAS17YOR181W 1902 nt7.19□□□□□ -1.26
RPT4P53549 TMT1YER175C 900 nt7.18□□□□□ -1.26
RPT4P53549 CIN4YMR138W 576 nt7.18□□□□□ -1.26
RPT4P53549 HST3YOR025W 1344 nt7.18□□□□□ -1.26
RPT4P53549 ECM27YJR106W 2178 nt7.18□□□□□ -1.26
RPT4P53549 PMT3YOR321W 2262 nt7.17□□□□□ -1.26
RPT4P53549 GEF1YJR040W 2340 nt7.17□□□□□ -1.26
RPT4P53549 SNO4YMR322C 714 nt7.17□□□□□ -1.26
RPT4P53549 HSP33YOR391C 714 nt7.17□□□□□ -1.26
RPT4P53549 HSP32YPL280W 714 nt7.17□□□□□ -1.26
RPT4P53549 ATG12YBR217W 561 nt7.17□□□□□ -1.26
RPT4P53549 RGT2YDL138W 2292 nt7.17□□□□□ -1.26
RPT4P53549 TKL2YBR117C 2046 nt7.17□□□□□ -1.26
RPT4P53549 PXL1YKR090W 2121 nt7.16□□□□□ -1.26
RPT4P53549 QCR8YJL166W 285 nt7.16□□□□□ -1.26
RPT4P53549 YMC1YPR058W 924 nt7.16□□□□□ -1.26
RPT4P53549 EXG1YLR300W 1347 nt7.16□□□□□ -1.26
RPT4P53549 NTE1YML059C 5040 nt7.16□□□□□ -1.26
RPT4P53549 YDL119CYDL119C 924 nt7.15□□□□□ -1.26
RPT4P53549 RPR2YIR015W 435 nt7.15□□□□□ -1.26
RPT4P53549 POP5YAL033W 522 nt7.15□□□□□ -1.26
RPT4P53549 MRPS5YBR251W 924 nt7.15□□□□□ -1.26
RPT4P53549 PYK2YOR347C 1521 nt7.15□□□□□ -1.27
RPT4P53549 PRI2YKL045W 1587 nt7.15□□□□□ -1.27
RPT4P53549 YCK1YHR135C 1617 nt7.15□□□□□ -1.27
RPT4P53549 RHB1YCR027C 630 nt7.14□□□□□ -1.27
RPT4P53549 LEU5YHR002W 1074 nt7.14□□□□□ -1.27
RPT4P53549 IES2YNL215W 963 nt7.14□□□□□ -1.27
RPT4P53549 MRPS16YPL013C 366 nt7.14□□□□□ -1.27
RPT4P53549 TPO3YPR156C 1869 nt7.14□□□□□ -1.27
RPT4P53549 HRQ1YDR291W 3234 nt7.14□□□□□ -1.27
RPT4P53549 UTR2YEL040W 1404 nt7.13□□□□□ -1.27
RPT4P53549 YTP1YNL237W 1380 nt7.13□□□□□ -1.27
RPT4P53549 MRK1YDL079C 1506 nt7.12□□□□□ -1.27
RPT4P53549 YEL068CYEL068C 333 nt7.12□□□□□ -1.27
RPT4P53549 AQR1YNL065W 1761 nt7.12□□□□□ -1.27
RPT4P53549 PYC2YBR218C 3543 nt7.12□□□□□ -1.27
RPT4P53549 PUF3YLL013C 2640 nt7.11□□□□□ -1.27
RPT4P53549 SUF5tG(CCC)O 72 nt7.11□□□□□ -1.27
RPT4P53549 WHI2YOR043W 1461 nt7.11□□□□□ -1.27
RPT4P53549 TSA1YML028W 591 nt7.1□□□□□ -1.27
RPT4P53549 EFM1YHL039W 1758 nt7.1□□□□□ -1.27
RPT4P53549 GON7YJL184W 372 nt7.09□□□□□ -1.27
RPT4P53549 AAD15YOL165C 432 nt7.09□□□□□ -1.27
RPT4P53549 SEC23YPR181C 2307 nt7.09□□□□□ -1.28
RPT4P53549 RAD24YER173W 1980 nt7.08□□□□□ -1.28
RPT4P53549 AIM33YML087C 939 nt7.08□□□□□ -1.28
RPT4P53549 YPR114WYPR114W 948 nt7.08□□□□□ -1.28
RPT4P53549 CTF3YLR381W 2202 nt7.07□□□□□ -1.28
RPT4P53549 GGC1YDL198C 903 nt7.07□□□□□ -1.28
RPT4P53549 MRPL22YNL177C 930 nt7.07□□□□□ -1.28
RPT4P53549 YPL041CYPL041C 624 nt7.07□□□□□ -1.28
RPT4P53549 AFG1YEL052W 1530 nt7.06□□□□□ -1.28
RPT4P53549 HDA1YNL021W 2121 nt7.06□□□□□ -1.28
RPT4P53549 CBP4YGR174C 513 nt7.06□□□□□ -1.28
RPT4P53549 OPI8YKR035C 642 nt7.06□□□□□ -1.28
RPT4P53549 KIN1YDR122W 3195 nt7.06□□□□□ -1.28
RPT4P53549 BRL1YHR036W 1416 nt7.05□□□□□ -1.28
RPT4P53549 MRP17YKL003C 396 nt7.05□□□□□ -1.28
RPT4P53549 UBC11YOR339C 471 nt7.05□□□□□ -1.28
RPT4P53549 DAP1YPL170W 459 nt7.05□□□□□ -1.28
RPT4P53549 PHB1YGR132C 864 nt7.04□□□□□ -1.28
RPT4P53549 HAP3YBL021C 435 nt7.04□□□□□ -1.28
RPT4P53549 COX5AYNL052W 462 nt7.04□□□□□ -1.28
RPT4P53549 ADY2YCR010C 852 nt7.03□□□□□ -1.28
RPT4P53549 YHR070C-AYHR070C-A 411 nt7.03□□□□□ -1.28
RPT4P53549 YPR204WYPR204W 3099 nt7.03□□□□□ -1.28
RPT4P53549 tR(ACG)DtR(ACG)D 73 nt7.02□□□□□ -1.29
RPT4P53549 tR(ACG)EtR(ACG)E 73 nt7.02□□□□□ -1.29
Retrieved 100 of 7,029 protein–RNA pairs in 160.9 ms