Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Amer2-203ENSMUST00000225247 2662 ntBASIC11.85□□□□□ -0.51
Sec61bQ9CQS8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sec61bQ9CQS8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Sec61bQ9CQS8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61bQ9CQS8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Sec61bQ9CQS8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61bQ9CQS8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61bQ9CQS8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Sec61bQ9CQS8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61bQ9CQS8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61bQ9CQS8 Gm42501-201ENSMUST00000200220 1026 ntBASIC11.84□□□□□ -0.51
Sec61bQ9CQS8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61bQ9CQS8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61bQ9CQS8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61bQ9CQS8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61bQ9CQS8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61bQ9CQS8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61bQ9CQS8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61bQ9CQS8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61bQ9CQS8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC11.83□□□□□ -0.52
Sec61bQ9CQS8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Sec61bQ9CQS8 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61bQ9CQS8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61bQ9CQS8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Sec61bQ9CQS8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61bQ9CQS8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Sec61bQ9CQS8 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC11.82□□□□□ -0.52
Sec61bQ9CQS8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61bQ9CQS8 Gm18755-201ENSMUST00000218030 1099 ntBASIC11.82□□□□□ -0.52
Sec61bQ9CQS8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC11.82□□□□□ -0.52
Sec61bQ9CQS8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61bQ9CQS8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61bQ9CQS8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61bQ9CQS8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC11.82□□□□□ -0.52
Sec61bQ9CQS8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sec61bQ9CQS8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec61bQ9CQS8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC11.81□□□□□ -0.52
Sec61bQ9CQS8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sec61bQ9CQS8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sec61bQ9CQS8 AC093043.1-201ENSMUST00000226700 898 ntBASIC11.81□□□□□ -0.52
Sec61bQ9CQS8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec61bQ9CQS8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sec61bQ9CQS8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sec61bQ9CQS8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sec61bQ9CQS8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sec61bQ9CQS8 Fezf2-202ENSMUST00000224023 1917 ntBASIC11.8□□□□□ -0.52
Sec61bQ9CQS8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sec61bQ9CQS8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sec61bQ9CQS8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sec61bQ9CQS8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61bQ9CQS8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61bQ9CQS8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61bQ9CQS8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61bQ9CQS8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61bQ9CQS8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61bQ9CQS8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61bQ9CQS8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Sec61bQ9CQS8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61bQ9CQS8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61bQ9CQS8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61bQ9CQS8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61bQ9CQS8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61bQ9CQS8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61bQ9CQS8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sec61bQ9CQS8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61bQ9CQS8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61bQ9CQS8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Sec61bQ9CQS8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61bQ9CQS8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC11.78□□□□□ -0.52
Sec61bQ9CQS8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC11.78□□□□□ -0.52
Sec61bQ9CQS8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC11.78□□□□□ -0.52
Sec61bQ9CQS8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61bQ9CQS8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61bQ9CQS8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Sec61bQ9CQS8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC11.77□□□□□ -0.53
Sec61bQ9CQS8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Sec61bQ9CQS8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61bQ9CQS8 Gm15039-201ENSMUST00000118914 875 ntBASIC11.77□□□□□ -0.53
Sec61bQ9CQS8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61bQ9CQS8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61bQ9CQS8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61bQ9CQS8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61bQ9CQS8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC11.77□□□□□ -0.53
Sec61bQ9CQS8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61bQ9CQS8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61bQ9CQS8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61bQ9CQS8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61bQ9CQS8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61bQ9CQS8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC11.76□□□□□ -0.53
Sec61bQ9CQS8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61bQ9CQS8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61bQ9CQS8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sec61bQ9CQS8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61bQ9CQS8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sec61bQ9CQS8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC11.76□□□□□ -0.53
Sec61bQ9CQS8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC11.76□□□□□ -0.53
Sec61bQ9CQS8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sec61bQ9CQS8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61bQ9CQS8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61bQ9CQS8 Gm13238-201ENSMUST00000117655 780 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms