Protein–RNA interactions for Protein: Q61120

Shc3, SHC-transforming protein 3, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc3Q61120 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Shc3Q61120 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Shc3Q61120 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Shc3Q61120 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Shc3Q61120 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Shc3Q61120 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC23.87■■□□□ 1.41
Shc3Q61120 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Shc3Q61120 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Shc3Q61120 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Shc3Q61120 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.86■■□□□ 1.41
Shc3Q61120 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Shc3Q61120 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
Shc3Q61120 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC23.85■■□□□ 1.41
Shc3Q61120 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Shc3Q61120 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Shc3Q61120 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Shc3Q61120 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Shc3Q61120 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Shc3Q61120 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Shc3Q61120 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Shc3Q61120 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.84■■□□□ 1.41
Shc3Q61120 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
Shc3Q61120 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Shc3Q61120 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Shc3Q61120 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.83■■□□□ 1.41
Shc3Q61120 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
Shc3Q61120 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Shc3Q61120 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Shc3Q61120 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.82■■□□□ 1.4
Shc3Q61120 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Shc3Q61120 Gm28731-201ENSMUST00000185564 1569 ntBASIC23.82■■□□□ 1.4
Shc3Q61120 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Shc3Q61120 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Shc3Q61120 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.81■■□□□ 1.4
Shc3Q61120 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Shc3Q61120 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Shc3Q61120 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Shc3Q61120 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Shc3Q61120 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Shc3Q61120 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Shc3Q61120 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Shc3Q61120 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
Shc3Q61120 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC23.8■■□□□ 1.4
Shc3Q61120 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Shc3Q61120 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Shc3Q61120 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Shc3Q61120 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Shc3Q61120 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Shc3Q61120 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Shc3Q61120 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Shc3Q61120 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Shc3Q61120 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Shc3Q61120 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Shc3Q61120 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Shc3Q61120 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Shc3Q61120 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Shc3Q61120 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Shc3Q61120 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Shc3Q61120 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Shc3Q61120 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.75■■□□□ 1.39
Shc3Q61120 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Shc3Q61120 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Shc3Q61120 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Shc3Q61120 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.74■■□□□ 1.39
Shc3Q61120 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Shc3Q61120 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Shc3Q61120 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Shc3Q61120 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.73■■□□□ 1.39
Shc3Q61120 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Shc3Q61120 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Shc3Q61120 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Shc3Q61120 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Shc3Q61120 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shc3Q61120 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.72■■□□□ 1.39
Shc3Q61120 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Shc3Q61120 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.72■■□□□ 1.39
Shc3Q61120 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shc3Q61120 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC23.72■■□□□ 1.39
Shc3Q61120 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shc3Q61120 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shc3Q61120 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Shc3Q61120 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Shc3Q61120 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Shc3Q61120 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.71■■□□□ 1.39
Shc3Q61120 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Shc3Q61120 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.71■■□□□ 1.39
Shc3Q61120 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Shc3Q61120 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
Shc3Q61120 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.7■■□□□ 1.38
Shc3Q61120 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC23.7■■□□□ 1.38
Shc3Q61120 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Shc3Q61120 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Shc3Q61120 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Shc3Q61120 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Shc3Q61120 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Shc3Q61120 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Shc3Q61120 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Shc3Q61120 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.67■■□□□ 1.38
Shc3Q61120 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Shc3Q61120 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms