Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmem40Q4FJU9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmem40Q4FJU9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmem40Q4FJU9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmem40Q4FJU9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tmem40Q4FJU9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmem40Q4FJU9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmem40Q4FJU9 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.77■□□□□ 0.6
Tmem40Q4FJU9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tmem40Q4FJU9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmem40Q4FJU9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmem40Q4FJU9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tmem40Q4FJU9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.77■□□□□ 0.59
Tmem40Q4FJU9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tmem40Q4FJU9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmem40Q4FJU9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tmem40Q4FJU9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.76■□□□□ 0.59
Tmem40Q4FJU9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Tmem40Q4FJU9 Gm13238-201ENSMUST00000117655 780 ntBASIC18.76■□□□□ 0.59
Tmem40Q4FJU9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmem40Q4FJU9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tmem40Q4FJU9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tmem40Q4FJU9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.75■□□□□ 0.59
Tmem40Q4FJU9 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.75■□□□□ 0.59
Tmem40Q4FJU9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tmem40Q4FJU9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Tmem40Q4FJU9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tmem40Q4FJU9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tmem40Q4FJU9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Tmem40Q4FJU9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tmem40Q4FJU9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tmem40Q4FJU9 Gm43566-201ENSMUST00000196851 808 ntBASIC18.74■□□□□ 0.59
Tmem40Q4FJU9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tmem40Q4FJU9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tmem40Q4FJU9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tmem40Q4FJU9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmem40Q4FJU9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmem40Q4FJU9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.73■□□□□ 0.59
Tmem40Q4FJU9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tmem40Q4FJU9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmem40Q4FJU9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Tmem40Q4FJU9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmem40Q4FJU9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmem40Q4FJU9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmem40Q4FJU9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Tmem40Q4FJU9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Tmem40Q4FJU9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmem40Q4FJU9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmem40Q4FJU9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Tmem40Q4FJU9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.72■□□□□ 0.59
Tmem40Q4FJU9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmem40Q4FJU9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmem40Q4FJU9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tmem40Q4FJU9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tmem40Q4FJU9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Tmem40Q4FJU9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Tmem40Q4FJU9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tmem40Q4FJU9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Tmem40Q4FJU9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tmem40Q4FJU9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.7■□□□□ 0.58
Tmem40Q4FJU9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.7■□□□□ 0.58
Tmem40Q4FJU9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tmem40Q4FJU9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tmem40Q4FJU9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tmem40Q4FJU9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tmem40Q4FJU9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tmem40Q4FJU9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Tmem40Q4FJU9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.69■□□□□ 0.58
Tmem40Q4FJU9 Gm45444-201ENSMUST00000211394 898 ntBASIC18.69■□□□□ 0.58
Tmem40Q4FJU9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tmem40Q4FJU9 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.68■□□□□ 0.58
Tmem40Q4FJU9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.68■□□□□ 0.58
Tmem40Q4FJU9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmem40Q4FJU9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmem40Q4FJU9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmem40Q4FJU9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmem40Q4FJU9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tmem40Q4FJU9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Tmem40Q4FJU9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Tmem40Q4FJU9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tmem40Q4FJU9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tmem40Q4FJU9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Tmem40Q4FJU9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.66■□□□□ 0.58
Tmem40Q4FJU9 Gm45102-201ENSMUST00000207427 857 ntBASIC18.66■□□□□ 0.58
Tmem40Q4FJU9 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.66■□□□□ 0.58
Tmem40Q4FJU9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tmem40Q4FJU9 Gm14117-201ENSMUST00000122417 843 ntBASIC18.65■□□□□ 0.58
Tmem40Q4FJU9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.65■□□□□ 0.58
Tmem40Q4FJU9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.65■□□□□ 0.58
Tmem40Q4FJU9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tmem40Q4FJU9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tmem40Q4FJU9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tmem40Q4FJU9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Tmem40Q4FJU9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Tmem40Q4FJU9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Tmem40Q4FJU9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tmem40Q4FJU9 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.64■□□□□ 0.57
Tmem40Q4FJU9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.64■□□□□ 0.57
Tmem40Q4FJU9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tmem40Q4FJU9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms