Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 RDN5-5RDN5-5 119 nt7.47□□□□□ -1.21
RPT4P53549 CSL4YNL232W 879 nt7.47□□□□□ -1.21
RPT4P53549 YPL250W-AYPL250W-A 288 nt7.47□□□□□ -1.21
RPT4P53549 EDE1YBL047C 4146 nt7.47□□□□□ -1.21
RPT4P53549 MTR3YGR158C 753 nt7.46□□□□□ -1.22
RPT4P53549 YNL017CYNL017C 339 nt7.46□□□□□ -1.22
RPT4P53549 ECM31YBR176W 939 nt7.46□□□□□ -1.22
RPT4P53549 HEM1YDR232W 1647 nt7.45□□□□□ -1.22
RPT4P53549 YBR241CYBR241C 1467 nt7.45□□□□□ -1.22
RPT4P53549 MAK31YCR020C-A 267 nt7.45□□□□□ -1.22
RPT4P53549 YOR012WYOR012W 414 nt7.45□□□□□ -1.22
RPT4P53549 LDB16YCL005W 771 nt7.45□□□□□ -1.22
RPT4P53549 PMA2YPL036W 2844 nt7.45□□□□□ -1.22
RPT4P53549 AIM34YMR003W 597 nt7.44□□□□□ -1.22
RPT4P53549 SHP1YBL058W 1272 nt7.44□□□□□ -1.22
RPT4P53549 KSH1YNL024C-A 219 nt7.44□□□□□ -1.22
RPT4P53549 YNL120CYNL120C 486 nt7.44□□□□□ -1.22
RPT4P53549 POX1YGL205W 2247 nt7.43□□□□□ -1.22
RPT4P53549 ERS1YCR075C 783 nt7.43□□□□□ -1.22
RPT4P53549 YDL085C-AYDL085C-A 207 nt7.43□□□□□ -1.22
RPT4P53549 ERP5YHR110W 639 nt7.43□□□□□ -1.22
RPT4P53549 HBN1YCL026C-B 582 nt7.43□□□□□ -1.22
RPT4P53549 ITR1YDR497C 1755 nt7.43□□□□□ -1.22
RPT4P53549 SKS1YPL026C 1509 nt7.42□□□□□ -1.22
RPT4P53549 GCV3YAL044C 513 nt7.42□□□□□ -1.22
RPT4P53549 MET30YIL046W 1923 nt7.42□□□□□ -1.22
RPT4P53549 CCT3YJL014W 1605 nt7.41□□□□□ -1.22
RPT4P53549 YET3YDL072C 612 nt7.41□□□□□ -1.22
RPT4P53549 DON1YDR273W 1098 nt7.41□□□□□ -1.22
RPT4P53549 RPS5YJR123W 678 nt7.41□□□□□ -1.22
RPT4P53549 MEH1YKR007W 555 nt7.41□□□□□ -1.22
RPT4P53549 YLR126CYLR126C 756 nt7.41□□□□□ -1.22
RPT4P53549 YNL200CYNL200C 741 nt7.41□□□□□ -1.22
RPT4P53549 AMD2YDR242W 1650 nt7.41□□□□□ -1.22
RPT4P53549 BUG1YDL099W 1026 nt7.4□□□□□ -1.22
RPT4P53549 JNM1YMR294W 1122 nt7.4□□□□□ -1.22
RPT4P53549 RPS3YNL178W 723 nt7.4□□□□□ -1.22
RPT4P53549 YBR056C-BYBR056C-B 159 nt7.4□□□□□ -1.22
RPT4P53549 MNS1YJR131W 1650 nt7.4□□□□□ -1.23
RPT4P53549 MCH2YKL221W 1422 nt7.39□□□□□ -1.23
RPT4P53549 MTF2YDL044C 1323 nt7.39□□□□□ -1.23
RPT4P53549 ECM14YHR132C 1293 nt7.39□□□□□ -1.23
RPT4P53549 AIM2YAL049C 741 nt7.39□□□□□ -1.23
RPT4P53549 YER137CYER137C 447 nt7.38□□□□□ -1.23
RPT4P53549 YPR160C-AYPR160C-A 285 nt7.38□□□□□ -1.23
RPT4P53549 ICL1YER065C 1674 nt7.38□□□□□ -1.23
RPT4P53549 RPP1YHR062C 882 nt7.37□□□□□ -1.23
RPT4P53549 YEL023CYEL023C 2049 nt7.37□□□□□ -1.23
RPT4P53549 PRS2YER099C 957 nt7.36□□□□□ -1.23
RPT4P53549 CAF40YNL288W 1122 nt7.36□□□□□ -1.23
RPT4P53549 ARC35YNR035C 1029 nt7.36□□□□□ -1.23
RPT4P53549 PRY3YJL078C 2646 nt7.36□□□□□ -1.23
RPT4P53549 TOS6YNL300W 309 nt7.35□□□□□ -1.23
RPT4P53549 MSY1YPL097W 1479 nt7.35□□□□□ -1.23
RPT4P53549 TAH11YJR046W 1815 nt7.34□□□□□ -1.23
RPT4P53549 YPT1YFL038C 621 nt7.34□□□□□ -1.23
RPT4P53549 YNR014WYNR014W 639 nt7.34□□□□□ -1.23
RPT4P53549 FRE5YOR384W 2085 nt7.34□□□□□ -1.23
RPT4P53549 PEX31YGR004W 1389 nt7.33□□□□□ -1.24
RPT4P53549 GCN3YKR026C 918 nt7.33□□□□□ -1.24
RPT4P53549 CBK1YNL161W 2271 nt7.32□□□□□ -1.24
RPT4P53549 GPH1YPR160W 2709 nt7.32□□□□□ -1.24
RPT4P53549 RIX7YLL034C 2514 nt7.32□□□□□ -1.24
RPT4P53549 CHA1YCL064C 1083 nt7.32□□□□□ -1.24
RPT4P53549 ASK1YKL052C 879 nt7.32□□□□□ -1.24
RPT4P53549 UTP4YDR324C 2331 nt7.31□□□□□ -1.24
RPT4P53549 DFM1YDR411C 1026 nt7.31□□□□□ -1.24
RPT4P53549 YDR415CYDR415C 1125 nt7.31□□□□□ -1.24
RPT4P53549 FBA1YKL060C 1080 nt7.31□□□□□ -1.24
RPT4P53549 snR82snR82 268 nt7.3□□□□□ -1.24
RPT4P53549 SQT1YIR012W 1296 nt7.3□□□□□ -1.24
RPT4P53549 SPO7YAL009W 780 nt7.3□□□□□ -1.24
RPT4P53549 MCH1YDL054C 1461 nt7.3□□□□□ -1.24
RPT4P53549 ILV1YER086W 1731 nt7.3□□□□□ -1.24
RPT4P53549 ADE12YNL220W 1302 nt7.29□□□□□ -1.24
RPT4P53549 MGM101YJR144W 810 nt7.29□□□□□ -1.24
RPT4P53549 NDE1YMR145C 1683 nt7.28□□□□□ -1.24
RPT4P53549 PAC10YGR078C 600 nt7.28□□□□□ -1.24
RPT4P53549 MTC2YKL098W 1074 nt7.28□□□□□ -1.24
RPT4P53549 MRPS12YNR036C 462 nt7.28□□□□□ -1.24
RPT4P53549 THI2YBR240C 1353 nt7.28□□□□□ -1.24
RPT4P53549 GSH1YJL101C 2037 nt7.28□□□□□ -1.24
RPT4P53549 UGX2YDL169C 672 nt7.27□□□□□ -1.25
RPT4P53549 RPN11YFR004W 921 nt7.27□□□□□ -1.25
RPT4P53549 AIM24YJR080C 1185 nt7.27□□□□□ -1.25
RPT4P53549 YLR312CYLR312C 1197 nt7.27□□□□□ -1.25
RPT4P53549 ISN1YOR155C 1353 nt7.26□□□□□ -1.25
RPT4P53549 DYS1YHR068W 1164 nt7.26□□□□□ -1.25
RPT4P53549 COX16YJL003W 357 nt7.26□□□□□ -1.25
RPT4P53549 RFS1YBR052C 633 nt7.26□□□□□ -1.25
RPT4P53549 NHA1YLR138W 2958 nt7.26□□□□□ -1.25
RPT4P53549 CYB2YML054C 1776 nt7.25□□□□□ -1.25
RPT4P53549 ADE17YMR120C 1779 nt7.25□□□□□ -1.25
RPT4P53549 CCR4YAL021C 2514 nt7.25□□□□□ -1.25
RPT4P53549 STF1YDL130W-A 261 nt7.25□□□□□ -1.25
RPT4P53549 BNA3YJL060W 1335 nt7.25□□□□□ -1.25
RPT4P53549 YDL129WYDL129W 876 nt7.24□□□□□ -1.25
RPT4P53549 HHY1YEL059W 309 nt7.24□□□□□ -1.25
RPT4P53549 LCB3YJL134W 1230 nt7.24□□□□□ -1.25
RPT4P53549 YJR107WYJR107W 987 nt7.24□□□□□ -1.25
Retrieved 100 of 7,029 protein–RNA pairs in 25.5 ms