Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Abca1P41233 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Abca1P41233 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.21■□□□□ 0.51
Abca1P41233 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.21■□□□□ 0.51
Abca1P41233 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Abca1P41233 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Abca1P41233 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Abca1P41233 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Abca1P41233 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Abca1P41233 Gm10232-201ENSMUST00000089221 720 ntBASIC18.2■□□□□ 0.5
Abca1P41233 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Abca1P41233 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Abca1P41233 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.2■□□□□ 0.5
Abca1P41233 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.2■□□□□ 0.5
Abca1P41233 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.2■□□□□ 0.5
Abca1P41233 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Abca1P41233 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Abca1P41233 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Abca1P41233 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.19■□□□□ 0.5
Abca1P41233 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Abca1P41233 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.19■□□□□ 0.5
Abca1P41233 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Abca1P41233 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Abca1P41233 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.18■□□□□ 0.5
Abca1P41233 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Abca1P41233 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.18■□□□□ 0.5
Abca1P41233 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.18■□□□□ 0.5
Abca1P41233 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abca1P41233 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abca1P41233 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abca1P41233 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Abca1P41233 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abca1P41233 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Abca1P41233 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Abca1P41233 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.16■□□□□ 0.5
Abca1P41233 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Abca1P41233 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Abca1P41233 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Abca1P41233 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Abca1P41233 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Abca1P41233 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Abca1P41233 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Abca1P41233 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.15■□□□□ 0.5
Abca1P41233 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Abca1P41233 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Abca1P41233 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Abca1P41233 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Abca1P41233 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Abca1P41233 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.14■□□□□ 0.49
Abca1P41233 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Abca1P41233 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Abca1P41233 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Abca1P41233 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Abca1P41233 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.14■□□□□ 0.49
Abca1P41233 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Abca1P41233 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Abca1P41233 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Abca1P41233 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.13■□□□□ 0.49
Abca1P41233 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Abca1P41233 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Abca1P41233 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Abca1P41233 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Abca1P41233 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Abca1P41233 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abca1P41233 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Abca1P41233 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Abca1P41233 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abca1P41233 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Abca1P41233 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Abca1P41233 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abca1P41233 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abca1P41233 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abca1P41233 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.11■□□□□ 0.49
Abca1P41233 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Abca1P41233 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Abca1P41233 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Abca1P41233 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Abca1P41233 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Abca1P41233 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Abca1P41233 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.1■□□□□ 0.49
Abca1P41233 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Abca1P41233 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Abca1P41233 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Abca1P41233 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Abca1P41233 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.1■□□□□ 0.49
Abca1P41233 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Abca1P41233 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Abca1P41233 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Abca1P41233 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Abca1P41233 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Abca1P41233 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Abca1P41233 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Abca1P41233 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Abca1P41233 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Abca1P41233 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Abca1P41233 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Abca1P41233 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Abca1P41233 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Abca1P41233 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Abca1P41233 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms