Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 SUF23tG(GCC)J2 71 nt6.31□□□□□ -1.4
TY2A-LR1P0C2J4 tG(GCC)MtG(GCC)M 71 nt6.31□□□□□ -1.4
TY2A-LR1P0C2J4 tG(GCC)O1tG(GCC)O1 71 nt6.31□□□□□ -1.4
TY2A-LR1P0C2J4 SUF17tG(GCC)O2 71 nt6.31□□□□□ -1.4
TY2A-LR1P0C2J4 tG(GCC)P1tG(GCC)P1 71 nt6.31□□□□□ -1.4
TY2A-LR1P0C2J4 tG(GCC)P2tG(GCC)P2 71 nt6.31□□□□□ -1.4
TY2A-LR1P0C2J4 FMO1YHR176W 1299 nt6.31□□□□□ -1.4
TY2A-LR1P0C2J4 TAF11YML015C 1041 nt6.31□□□□□ -1.4
TY2A-LR1P0C2J4 OCA1YNL099C 717 nt6.31□□□□□ -1.4
TY2A-LR1P0C2J4 YNR014WYNR014W 639 nt6.31□□□□□ -1.4
TY2A-LR1P0C2J4 YBR113WYBR113W 483 nt6.31□□□□□ -1.4
TY2A-LR1P0C2J4 IME2YJL106W 1938 nt6.31□□□□□ -1.4
TY2A-LR1P0C2J4 KIN1YDR122W 3195 nt6.3□□□□□ -1.4
TY2A-LR1P0C2J4 CMK2YOL016C 1344 nt6.3□□□□□ -1.4
TY2A-LR1P0C2J4 YOS9YDR057W 1629 nt6.3□□□□□ -1.4
TY2A-LR1P0C2J4 YKL077WYKL077W 1179 nt6.3□□□□□ -1.4
TY2A-LR1P0C2J4 GCN3YKR026C 918 nt6.3□□□□□ -1.4
TY2A-LR1P0C2J4 AST1YBL069W 1290 nt6.3□□□□□ -1.4
TY2A-LR1P0C2J4 MRPS18YNL306W 654 nt6.3□□□□□ -1.4
TY2A-LR1P0C2J4 GSH1YJL101C 2037 nt6.3□□□□□ -1.4
TY2A-LR1P0C2J4 YHK8YHR048W 1545 nt6.3□□□□□ -1.4
TY2A-LR1P0C2J4 EDC3YEL015W 1656 nt6.3□□□□□ -1.4
TY2A-LR1P0C2J4 YRB2YIL063C 984 nt6.29□□□□□ -1.4
TY2A-LR1P0C2J4 CDS1YBR029C 1374 nt6.29□□□□□ -1.4
TY2A-LR1P0C2J4 COX10YPL172C 1389 nt6.29□□□□□ -1.4
TY2A-LR1P0C2J4 CNM67YNL225C 1746 nt6.28□□□□□ -1.4
TY2A-LR1P0C2J4 PPH22YDL188C 1134 nt6.28□□□□□ -1.4
TY2A-LR1P0C2J4 YMR147WYMR147W 672 nt6.28□□□□□ -1.4
TY2A-LR1P0C2J4 MRPL23YOR150W 492 nt6.28□□□□□ -1.4
TY2A-LR1P0C2J4 EFM1YHL039W 1758 nt6.28□□□□□ -1.4
TY2A-LR1P0C2J4 PEX31YGR004W 1389 nt6.28□□□□□ -1.4
TY2A-LR1P0C2J4 YOR389WYOR389W 1875 nt6.28□□□□□ -1.4
TY2A-LR1P0C2J4 ASN2YGR124W 1719 nt6.28□□□□□ -1.4
TY2A-LR1P0C2J4 ICL2YPR006C 1728 nt6.28□□□□□ -1.4
TY2A-LR1P0C2J4 STT3YGL022W 2157 nt6.27□□□□□ -1.41
TY2A-LR1P0C2J4 YHR213W-BYHR213W-B 300 nt6.27□□□□□ -1.41
TY2A-LR1P0C2J4 YAR064WYAR064W 300 nt6.27□□□□□ -1.41
TY2A-LR1P0C2J4 SEC23YPR181C 2307 nt6.27□□□□□ -1.41
TY2A-LR1P0C2J4 SAL1YNL083W 1485 nt6.27□□□□□ -1.41
TY2A-LR1P0C2J4 CBT1YKL208W 816 nt6.26□□□□□ -1.41
TY2A-LR1P0C2J4 RFC4YOL094C 972 nt6.26□□□□□ -1.41
TY2A-LR1P0C2J4 ILV6YCL009C 930 nt6.26□□□□□ -1.41
TY2A-LR1P0C2J4 SLA2YNL243W 2907 nt6.26□□□□□ -1.41
TY2A-LR1P0C2J4 EDE1YBL047C 4146 nt6.26□□□□□ -1.41
TY2A-LR1P0C2J4 PRY3YJL078C 2646 nt6.26□□□□□ -1.41
TY2A-LR1P0C2J4 GPH1YPR160W 2709 nt6.26□□□□□ -1.41
TY2A-LR1P0C2J4 YIL029W-AYIL029W-A 372 nt6.25□□□□□ -1.41
TY2A-LR1P0C2J4 PET112YBL080C 1626 nt6.25□□□□□ -1.41
TY2A-LR1P0C2J4 APM1YPL259C 1428 nt6.25□□□□□ -1.41
TY2A-LR1P0C2J4 RSC2YLR357W 2670 nt6.24□□□□□ -1.41
TY2A-LR1P0C2J4 HEL1YKR017C 1656 nt6.24□□□□□ -1.41
TY2A-LR1P0C2J4 IMG1YCR046C 510 nt6.24□□□□□ -1.41
TY2A-LR1P0C2J4 YDR415CYDR415C 1125 nt6.24□□□□□ -1.41
TY2A-LR1P0C2J4 HIS1YER055C 894 nt6.24□□□□□ -1.41
TY2A-LR1P0C2J4 DYS1YHR068W 1164 nt6.24□□□□□ -1.41
TY2A-LR1P0C2J4 CDC11YJR076C 1248 nt6.24□□□□□ -1.41
TY2A-LR1P0C2J4 KSH1YNL024C-A 219 nt6.24□□□□□ -1.41
TY2A-LR1P0C2J4 RPL5YPL131W 894 nt6.24□□□□□ -1.41
TY2A-LR1P0C2J4 DEF1YKL054C 2217 nt6.23□□□□□ -1.41
TY2A-LR1P0C2J4 BPL1YDL141W 2073 nt6.23□□□□□ -1.41
TY2A-LR1P0C2J4 GCG1YER163C 699 nt6.23□□□□□ -1.41
TY2A-LR1P0C2J4 AIM20YIL158W 615 nt6.23□□□□□ -1.41
TY2A-LR1P0C2J4 YJR107WYJR107W 987 nt6.23□□□□□ -1.41
TY2A-LR1P0C2J4 YJR146WYJR146W 354 nt6.23□□□□□ -1.41
TY2A-LR1P0C2J4 CUE4YML101C 354 nt6.23□□□□□ -1.41
TY2A-LR1P0C2J4 YPL250W-AYPL250W-A 288 nt6.23□□□□□ -1.41
TY2A-LR1P0C2J4 OPI11YPR044C 354 nt6.23□□□□□ -1.41
TY2A-LR1P0C2J4 ADH5YBR145W 1056 nt6.23□□□□□ -1.41
TY2A-LR1P0C2J4 YFR006WYFR006W 1608 nt6.23□□□□□ -1.41
TY2A-LR1P0C2J4 PRP40YKL012W 1752 nt6.22□□□□□ -1.41
TY2A-LR1P0C2J4 OM45YIL136W 1182 nt6.22□□□□□ -1.41
TY2A-LR1P0C2J4 MIA40YKL195W 1212 nt6.22□□□□□ -1.41
TY2A-LR1P0C2J4 YKR032WYKR032W 315 nt6.22□□□□□ -1.41
TY2A-LR1P0C2J4 CWC25YNL245C 540 nt6.22□□□□□ -1.41
TY2A-LR1P0C2J4 DFR1YOR236W 636 nt6.22□□□□□ -1.41
TY2A-LR1P0C2J4 YPL257WYPL257W 582 nt6.22□□□□□ -1.41
TY2A-LR1P0C2J4 GUF1YLR289W 1938 nt6.22□□□□□ -1.41
TY2A-LR1P0C2J4 HEM1YDR232W 1647 nt6.21□□□□□ -1.41
TY2A-LR1P0C2J4 FAL1YDR021W 1200 nt6.21□□□□□ -1.42
TY2A-LR1P0C2J4 EAF5YEL018W 840 nt6.21□□□□□ -1.42
TY2A-LR1P0C2J4 YPT1YFL038C 621 nt6.21□□□□□ -1.42
TY2A-LR1P0C2J4 SRN2YLR119W 642 nt6.21□□□□□ -1.42
TY2A-LR1P0C2J4 OGG1YML060W 1131 nt6.21□□□□□ -1.42
TY2A-LR1P0C2J4 TOS6YNL300W 309 nt6.21□□□□□ -1.42
TY2A-LR1P0C2J4 YCR061WYCR061W 1896 nt6.21□□□□□ -1.42
TY2A-LR1P0C2J4 MPA43YNL249C 1629 nt6.21□□□□□ -1.42
TY2A-LR1P0C2J4 RQC1YDR333C 2172 nt6.2□□□□□ -1.42
TY2A-LR1P0C2J4 YLL066CYLL066C 3618 nt6.2□□□□□ -1.42
TY2A-LR1P0C2J4 MEU1YLR017W 1014 nt6.2□□□□□ -1.42
TY2A-LR1P0C2J4 RUF23RUF23 254 nt6.2□□□□□ -1.42
TY2A-LR1P0C2J4 VMA3YEL027W 483 nt6.19□□□□□ -1.42
TY2A-LR1P0C2J4 LYS1YIR034C 1122 nt6.19□□□□□ -1.42
TY2A-LR1P0C2J4 OPI8YKR035C 642 nt6.19□□□□□ -1.42
TY2A-LR1P0C2J4 YNR048WYNR048W 1182 nt6.19□□□□□ -1.42
TY2A-LR1P0C2J4 ECM2YBR065C 1095 nt6.19□□□□□ -1.42
TY2A-LR1P0C2J4 YMR027WYMR027W 1413 nt6.18□□□□□ -1.42
TY2A-LR1P0C2J4 GUS1YGL245W 2127 nt6.18□□□□□ -1.42
TY2A-LR1P0C2J4 DID2YKR035W-A 615 nt6.18□□□□□ -1.42
TY2A-LR1P0C2J4 MHT1YLL062C 975 nt6.18□□□□□ -1.42
TY2A-LR1P0C2J4 YNL194CYNL194C 906 nt6.18□□□□□ -1.42
Retrieved 100 of 7,029 protein–RNA pairs in 54.6 ms