Protein–RNA interactions for Protein: P04944

Ig kappa chain V-VI region NQ5-78.2.6, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04944 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
P04944 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
P04944 Gm22567-201ENSMUST00000175542 342 ntBASIC17.22■□□□□ 0.35
P04944 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
P04944 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P04944 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P04944 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P04944 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
P04944 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.21■□□□□ 0.35
P04944 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
P04944 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P04944 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
P04944 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
P04944 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
P04944 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
P04944 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
P04944 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
P04944 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P04944 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
P04944 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
P04944 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
P04944 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
P04944 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
P04944 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P04944 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
P04944 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
P04944 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
P04944 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P04944 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P04944 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
P04944 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P04944 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
P04944 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
P04944 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04944 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
P04944 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04944 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.17■□□□□ 0.34
P04944 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04944 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.16■□□□□ 0.34
P04944 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04944 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.16■□□□□ 0.34
P04944 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04944 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
P04944 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04944 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04944 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
P04944 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.15■□□□□ 0.34
P04944 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04944 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.15■□□□□ 0.34
P04944 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04944 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04944 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04944 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.14■□□□□ 0.33
P04944 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04944 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.14■□□□□ 0.33
P04944 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04944 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04944 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04944 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04944 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04944 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04944 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P04944 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
P04944 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.13■□□□□ 0.33
P04944 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.13■□□□□ 0.33
P04944 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
P04944 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04944 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
P04944 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04944 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04944 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04944 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P04944 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
P04944 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.12■□□□□ 0.33
P04944 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04944 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.12■□□□□ 0.33
P04944 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04944 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04944 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04944 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04944 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04944 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04944 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04944 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04944 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04944 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
P04944 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04944 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04944 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04944 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04944 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
P04944 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.1■□□□□ 0.33
P04944 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P04944 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
P04944 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P04944 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
P04944 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.09■□□□□ 0.33
P04944 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P04944 Gm6311-201ENSMUST00000073790 878 ntBASIC17.09■□□□□ 0.33
P04944 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms