Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.77■□□□□ 0.92
Lhx6Q9R1R0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Lhx6Q9R1R0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Lhx6Q9R1R0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx6Q9R1R0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx6Q9R1R0 Gm9812-201ENSMUST00000061934 968 ntBASIC20.76■□□□□ 0.91
Lhx6Q9R1R0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx6Q9R1R0 Gm13241-201ENSMUST00000094493 780 ntBASIC20.76■□□□□ 0.91
Lhx6Q9R1R0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx6Q9R1R0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx6Q9R1R0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.75■□□□□ 0.91
Lhx6Q9R1R0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.75■□□□□ 0.91
Lhx6Q9R1R0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx6Q9R1R0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx6Q9R1R0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx6Q9R1R0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lhx6Q9R1R0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Lhx6Q9R1R0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lhx6Q9R1R0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.74■□□□□ 0.91
Lhx6Q9R1R0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lhx6Q9R1R0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lhx6Q9R1R0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Lhx6Q9R1R0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lhx6Q9R1R0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lhx6Q9R1R0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lhx6Q9R1R0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lhx6Q9R1R0 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.72■□□□□ 0.91
Lhx6Q9R1R0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lhx6Q9R1R0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lhx6Q9R1R0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lhx6Q9R1R0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.72■□□□□ 0.91
Lhx6Q9R1R0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lhx6Q9R1R0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lhx6Q9R1R0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lhx6Q9R1R0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lhx6Q9R1R0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lhx6Q9R1R0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Lhx6Q9R1R0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lhx6Q9R1R0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.69■□□□□ 0.9
Lhx6Q9R1R0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.69■□□□□ 0.9
Lhx6Q9R1R0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lhx6Q9R1R0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Lhx6Q9R1R0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lhx6Q9R1R0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Lhx6Q9R1R0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lhx6Q9R1R0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lhx6Q9R1R0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Lhx6Q9R1R0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.67■□□□□ 0.9
Lhx6Q9R1R0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lhx6Q9R1R0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lhx6Q9R1R0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lhx6Q9R1R0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lhx6Q9R1R0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Lhx6Q9R1R0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lhx6Q9R1R0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lhx6Q9R1R0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lhx6Q9R1R0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lhx6Q9R1R0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lhx6Q9R1R0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.65■□□□□ 0.9
Lhx6Q9R1R0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lhx6Q9R1R0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Lhx6Q9R1R0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.64■□□□□ 0.89
Lhx6Q9R1R0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lhx6Q9R1R0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lhx6Q9R1R0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lhx6Q9R1R0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lhx6Q9R1R0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.63■□□□□ 0.89
Lhx6Q9R1R0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.63■□□□□ 0.89
Lhx6Q9R1R0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lhx6Q9R1R0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lhx6Q9R1R0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lhx6Q9R1R0 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.62■□□□□ 0.89
Lhx6Q9R1R0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.62■□□□□ 0.89
Lhx6Q9R1R0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lhx6Q9R1R0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lhx6Q9R1R0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lhx6Q9R1R0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lhx6Q9R1R0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.61■□□□□ 0.89
Lhx6Q9R1R0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lhx6Q9R1R0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.6■□□□□ 0.89
Lhx6Q9R1R0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lhx6Q9R1R0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lhx6Q9R1R0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lhx6Q9R1R0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lhx6Q9R1R0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lhx6Q9R1R0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lhx6Q9R1R0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lhx6Q9R1R0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lhx6Q9R1R0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lhx6Q9R1R0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Lhx6Q9R1R0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lhx6Q9R1R0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lhx6Q9R1R0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.58■□□□□ 0.89
Lhx6Q9R1R0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lhx6Q9R1R0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lhx6Q9R1R0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.57■□□□□ 0.88
Lhx6Q9R1R0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lhx6Q9R1R0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lhx6Q9R1R0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lhx6Q9R1R0 Terc-201ENSMUST00000082862 423 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms