Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rfc3Q8R323 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rfc3Q8R323 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rfc3Q8R323 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rfc3Q8R323 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rfc3Q8R323 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rfc3Q8R323 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Rfc3Q8R323 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rfc3Q8R323 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rfc3Q8R323 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.45■□□□□ 0.86
Rfc3Q8R323 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfc3Q8R323 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Rfc3Q8R323 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.45■□□□□ 0.86
Rfc3Q8R323 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Rfc3Q8R323 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Rfc3Q8R323 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfc3Q8R323 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfc3Q8R323 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfc3Q8R323 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Rfc3Q8R323 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfc3Q8R323 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfc3Q8R323 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfc3Q8R323 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfc3Q8R323 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rfc3Q8R323 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Rfc3Q8R323 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rfc3Q8R323 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfc3Q8R323 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rfc3Q8R323 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfc3Q8R323 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfc3Q8R323 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfc3Q8R323 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfc3Q8R323 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rfc3Q8R323 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.42■□□□□ 0.86
Rfc3Q8R323 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.42■□□□□ 0.86
Rfc3Q8R323 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfc3Q8R323 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Rfc3Q8R323 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Rfc3Q8R323 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfc3Q8R323 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.41■□□□□ 0.86
Rfc3Q8R323 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.41■□□□□ 0.86
Rfc3Q8R323 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfc3Q8R323 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rfc3Q8R323 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Rfc3Q8R323 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.4■□□□□ 0.86
Rfc3Q8R323 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Rfc3Q8R323 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rfc3Q8R323 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rfc3Q8R323 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Rfc3Q8R323 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Rfc3Q8R323 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.39■□□□□ 0.85
Rfc3Q8R323 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.39■□□□□ 0.85
Rfc3Q8R323 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.38■□□□□ 0.85
Rfc3Q8R323 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Rfc3Q8R323 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rfc3Q8R323 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rfc3Q8R323 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rfc3Q8R323 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.37■□□□□ 0.85
Rfc3Q8R323 Gm10420-201ENSMUST00000121713 882 ntBASIC20.37■□□□□ 0.85
Rfc3Q8R323 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.37■□□□□ 0.85
Rfc3Q8R323 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Rfc3Q8R323 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Rfc3Q8R323 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Rfc3Q8R323 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rfc3Q8R323 Gm44428-201ENSMUST00000204474 874 ntBASIC20.36■□□□□ 0.85
Rfc3Q8R323 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rfc3Q8R323 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfc3Q8R323 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfc3Q8R323 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfc3Q8R323 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfc3Q8R323 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Rfc3Q8R323 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rfc3Q8R323 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfc3Q8R323 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.34■□□□□ 0.85
Rfc3Q8R323 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.34■□□□□ 0.85
Rfc3Q8R323 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfc3Q8R323 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.34■□□□□ 0.85
Rfc3Q8R323 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfc3Q8R323 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfc3Q8R323 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfc3Q8R323 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rfc3Q8R323 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rfc3Q8R323 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rfc3Q8R323 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rfc3Q8R323 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rfc3Q8R323 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rfc3Q8R323 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfc3Q8R323 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfc3Q8R323 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rfc3Q8R323 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rfc3Q8R323 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfc3Q8R323 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Rfc3Q8R323 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.3■□□□□ 0.84
Rfc3Q8R323 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rfc3Q8R323 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfc3Q8R323 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rfc3Q8R323 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rfc3Q8R323 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfc3Q8R323 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfc3Q8R323 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms