Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb7Q8CDY9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb7Q8CDY9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Pcdhb7Q8CDY9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Pcdhb7Q8CDY9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb7Q8CDY9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.21■■□□□ 1.15
Pcdhb7Q8CDY9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb7Q8CDY9 Gm45364-201ENSMUST00000210883 159 ntBASIC22.21■■□□□ 1.15
Pcdhb7Q8CDY9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Pcdhb7Q8CDY9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
Pcdhb7Q8CDY9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb7Q8CDY9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb7Q8CDY9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb7Q8CDY9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb7Q8CDY9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb7Q8CDY9 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.2■■□□□ 1.14
Pcdhb7Q8CDY9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb7Q8CDY9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.19■■□□□ 1.14
Pcdhb7Q8CDY9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb7Q8CDY9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Pcdhb7Q8CDY9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb7Q8CDY9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb7Q8CDY9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.18■■□□□ 1.14
Pcdhb7Q8CDY9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.18■■□□□ 1.14
Pcdhb7Q8CDY9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Pcdhb7Q8CDY9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb7Q8CDY9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.17■■□□□ 1.14
Pcdhb7Q8CDY9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Pcdhb7Q8CDY9 Gm6311-201ENSMUST00000073790 878 ntBASIC22.17■■□□□ 1.14
Pcdhb7Q8CDY9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhb7Q8CDY9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhb7Q8CDY9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.17■■□□□ 1.14
Pcdhb7Q8CDY9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb7Q8CDY9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb7Q8CDY9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.16■■□□□ 1.14
Pcdhb7Q8CDY9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb7Q8CDY9 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.16■■□□□ 1.14
Pcdhb7Q8CDY9 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.16■■□□□ 1.14
Pcdhb7Q8CDY9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Pcdhb7Q8CDY9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb7Q8CDY9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb7Q8CDY9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb7Q8CDY9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.15■■□□□ 1.14
Pcdhb7Q8CDY9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb7Q8CDY9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.15■■□□□ 1.14
Pcdhb7Q8CDY9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdhb7Q8CDY9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdhb7Q8CDY9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.14■■□□□ 1.13
Pcdhb7Q8CDY9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhb7Q8CDY9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.13■■□□□ 1.13
Pcdhb7Q8CDY9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb7Q8CDY9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb7Q8CDY9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.13■■□□□ 1.13
Pcdhb7Q8CDY9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.13■■□□□ 1.13
Pcdhb7Q8CDY9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Pcdhb7Q8CDY9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.12■■□□□ 1.13
Pcdhb7Q8CDY9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.12■■□□□ 1.13
Pcdhb7Q8CDY9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb7Q8CDY9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb7Q8CDY9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb7Q8CDY9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb7Q8CDY9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb7Q8CDY9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb7Q8CDY9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb7Q8CDY9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.11■■□□□ 1.13
Pcdhb7Q8CDY9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb7Q8CDY9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb7Q8CDY9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb7Q8CDY9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb7Q8CDY9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb7Q8CDY9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb7Q8CDY9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.1■■□□□ 1.13
Pcdhb7Q8CDY9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.1■■□□□ 1.13
Pcdhb7Q8CDY9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb7Q8CDY9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb7Q8CDY9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb7Q8CDY9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb7Q8CDY9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.09■■□□□ 1.13
Pcdhb7Q8CDY9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb7Q8CDY9 Terc-201ENSMUST00000082862 423 ntBASIC22.09■■□□□ 1.13
Pcdhb7Q8CDY9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb7Q8CDY9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhb7Q8CDY9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhb7Q8CDY9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhb7Q8CDY9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Pcdhb7Q8CDY9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Pcdhb7Q8CDY9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
Pcdhb7Q8CDY9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhb7Q8CDY9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Pcdhb7Q8CDY9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Pcdhb7Q8CDY9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.08■■□□□ 1.12
Pcdhb7Q8CDY9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb7Q8CDY9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb7Q8CDY9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.07■■□□□ 1.12
Pcdhb7Q8CDY9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb7Q8CDY9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
Pcdhb7Q8CDY9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb7Q8CDY9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb7Q8CDY9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb7Q8CDY9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms