Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Casc1Q6TDU8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Casc1Q6TDU8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Casc1Q6TDU8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Casc1Q6TDU8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.35■■□□□ 1.81
Casc1Q6TDU8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Casc1Q6TDU8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
Casc1Q6TDU8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC26.34■■□□□ 1.81
Casc1Q6TDU8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
Casc1Q6TDU8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Casc1Q6TDU8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Casc1Q6TDU8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Casc1Q6TDU8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC26.33■■□□□ 1.81
Casc1Q6TDU8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Casc1Q6TDU8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Casc1Q6TDU8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Casc1Q6TDU8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Casc1Q6TDU8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC26.33■■□□□ 1.81
Casc1Q6TDU8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Casc1Q6TDU8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Casc1Q6TDU8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Casc1Q6TDU8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Casc1Q6TDU8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Casc1Q6TDU8 Gm11175-201ENSMUST00000116172 543 ntBASIC26.31■■□□□ 1.8
Casc1Q6TDU8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Casc1Q6TDU8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Casc1Q6TDU8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC26.31■■□□□ 1.8
Casc1Q6TDU8 Gm42699-201ENSMUST00000198104 1657 ntBASIC26.31■■□□□ 1.8
Casc1Q6TDU8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Casc1Q6TDU8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC26.3■■□□□ 1.8
Casc1Q6TDU8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Casc1Q6TDU8 Pkd1-207ENSMUST00000228550 1050 ntBASIC26.3■■□□□ 1.8
Casc1Q6TDU8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC26.3■■□□□ 1.8
Casc1Q6TDU8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Casc1Q6TDU8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Casc1Q6TDU8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Casc1Q6TDU8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Casc1Q6TDU8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Casc1Q6TDU8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC26.28■■□□□ 1.8
Casc1Q6TDU8 Gm12818-201ENSMUST00000117562 1349 ntBASIC26.28■■□□□ 1.8
Casc1Q6TDU8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Casc1Q6TDU8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Casc1Q6TDU8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Casc1Q6TDU8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Casc1Q6TDU8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Casc1Q6TDU8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Casc1Q6TDU8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Casc1Q6TDU8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Casc1Q6TDU8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Casc1Q6TDU8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Casc1Q6TDU8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Casc1Q6TDU8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Casc1Q6TDU8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Casc1Q6TDU8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Casc1Q6TDU8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Casc1Q6TDU8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Casc1Q6TDU8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Casc1Q6TDU8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC26.24■■□□□ 1.79
Casc1Q6TDU8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Casc1Q6TDU8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
Casc1Q6TDU8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Casc1Q6TDU8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Casc1Q6TDU8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Casc1Q6TDU8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC26.23■■□□□ 1.79
Casc1Q6TDU8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Casc1Q6TDU8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Casc1Q6TDU8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Casc1Q6TDU8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC26.22■■□□□ 1.79
Casc1Q6TDU8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC26.22■■□□□ 1.79
Casc1Q6TDU8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC26.21■■□□□ 1.79
Casc1Q6TDU8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Casc1Q6TDU8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC26.21■■□□□ 1.79
Casc1Q6TDU8 Gm9812-201ENSMUST00000061934 968 ntBASIC26.21■■□□□ 1.79
Casc1Q6TDU8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Casc1Q6TDU8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC26.21■■□□□ 1.79
Casc1Q6TDU8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
Casc1Q6TDU8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Casc1Q6TDU8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Casc1Q6TDU8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Casc1Q6TDU8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Casc1Q6TDU8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Casc1Q6TDU8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Casc1Q6TDU8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC26.2■■□□□ 1.78
Casc1Q6TDU8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Casc1Q6TDU8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Casc1Q6TDU8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Casc1Q6TDU8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Casc1Q6TDU8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Casc1Q6TDU8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Casc1Q6TDU8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Casc1Q6TDU8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC26.18■■□□□ 1.78
Casc1Q6TDU8 Scarna2-201ENSMUST00000157560 414 ntBASIC26.18■■□□□ 1.78
Casc1Q6TDU8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Casc1Q6TDU8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Casc1Q6TDU8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC26.18■■□□□ 1.78
Casc1Q6TDU8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Casc1Q6TDU8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Casc1Q6TDU8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC26.18■■□□□ 1.78
Casc1Q6TDU8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Casc1Q6TDU8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms