Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Foxc1Q61572 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.14■□□□□ 0.17
Foxc1Q61572 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Foxc1Q61572 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Foxc1Q61572 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Foxc1Q61572 Gm9910-201ENSMUST00000195385 1550 ntBASIC16.13■□□□□ 0.17
Foxc1Q61572 Gm17641-201ENSMUST00000166328 2350 ntBASIC16.13■□□□□ 0.17
Foxc1Q61572 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Foxc1Q61572 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Foxc1Q61572 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Foxc1Q61572 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.13■□□□□ 0.17
Foxc1Q61572 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Foxc1Q61572 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Foxc1Q61572 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Foxc1Q61572 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxc1Q61572 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
Foxc1Q61572 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxc1Q61572 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxc1Q61572 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Foxc1Q61572 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxc1Q61572 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxc1Q61572 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxc1Q61572 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Foxc1Q61572 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Foxc1Q61572 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Foxc1Q61572 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Foxc1Q61572 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.11■□□□□ 0.17
Foxc1Q61572 Gm12366-201ENSMUST00000121722 873 ntBASIC16.11■□□□□ 0.17
Foxc1Q61572 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.11■□□□□ 0.17
Foxc1Q61572 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.11■□□□□ 0.17
Foxc1Q61572 Gm5786-201ENSMUST00000085368 882 ntBASIC16.11■□□□□ 0.17
Foxc1Q61572 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxc1Q61572 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxc1Q61572 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Foxc1Q61572 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Foxc1Q61572 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Foxc1Q61572 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxc1Q61572 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxc1Q61572 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxc1Q61572 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxc1Q61572 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Foxc1Q61572 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Foxc1Q61572 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Foxc1Q61572 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Foxc1Q61572 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxc1Q61572 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Foxc1Q61572 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxc1Q61572 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxc1Q61572 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxc1Q61572 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Foxc1Q61572 Gm27502-201ENSMUST00000183495 199 ntBASIC16.08■□□□□ 0.16
Foxc1Q61572 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Foxc1Q61572 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Foxc1Q61572 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Foxc1Q61572 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Foxc1Q61572 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Foxc1Q61572 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Foxc1Q61572 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Foxc1Q61572 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Foxc1Q61572 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Foxc1Q61572 Gm7332-201ENSMUST00000118351 454 ntBASIC16.07■□□□□ 0.16
Foxc1Q61572 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Foxc1Q61572 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Foxc1Q61572 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Foxc1Q61572 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Foxc1Q61572 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Foxc1Q61572 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Foxc1Q61572 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.06■□□□□ 0.16
Foxc1Q61572 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.06■□□□□ 0.16
Foxc1Q61572 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Foxc1Q61572 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Foxc1Q61572 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Foxc1Q61572 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.05■□□□□ 0.16
Foxc1Q61572 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Foxc1Q61572 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.05■□□□□ 0.16
Foxc1Q61572 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Foxc1Q61572 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Foxc1Q61572 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Foxc1Q61572 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Foxc1Q61572 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.05■□□□□ 0.16
Foxc1Q61572 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Foxc1Q61572 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Foxc1Q61572 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Foxc1Q61572 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Foxc1Q61572 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC16.05■□□□□ 0.16
Foxc1Q61572 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Foxc1Q61572 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Foxc1Q61572 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
Foxc1Q61572 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Foxc1Q61572 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Foxc1Q61572 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Foxc1Q61572 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.04■□□□□ 0.16
Foxc1Q61572 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Foxc1Q61572 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.04■□□□□ 0.16
Foxc1Q61572 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.04■□□□□ 0.16
Foxc1Q61572 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Foxc1Q61572 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Foxc1Q61572 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Foxc1Q61572 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Foxc1Q61572 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms