Protein–RNA interactions for Protein: P38272

SHE3, SWI5-dependent HO expression protein 3, yeastyeast

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE3P38272 FSF1YOR271C 984 nt6.84□□□□□ -1.31
SHE3P38272 CTF19YPL018W 1110 nt6.84□□□□□ -1.31
SHE3P38272 HXT13YEL069C 1695 nt6.84□□□□□ -1.32
SHE3P38272 MSB3YNL293W 1902 nt6.84□□□□□ -1.32
SHE3P38272 CHA1YCL064C 1083 nt6.83□□□□□ -1.32
SHE3P38272 RUF23RUF23 254 nt6.83□□□□□ -1.32
SHE3P38272 CCT8YJL008C 1707 nt6.83□□□□□ -1.32
SHE3P38272 YER137CYER137C 447 nt6.82□□□□□ -1.32
SHE3P38272 LYS1YIR034C 1122 nt6.82□□□□□ -1.32
SHE3P38272 FAL1YDR021W 1200 nt6.81□□□□□ -1.32
SHE3P38272 YFL013W-AYFL013W-A 804 nt6.81□□□□□ -1.32
SHE3P38272 RDN5-2RDN5-2 119 nt6.81□□□□□ -1.32
SHE3P38272 RDN5-3RDN5-3 119 nt6.81□□□□□ -1.32
SHE3P38272 RDN5-4RDN5-4 119 nt6.81□□□□□ -1.32
SHE3P38272 RDN5-5RDN5-5 119 nt6.81□□□□□ -1.32
SHE3P38272 YML018CYML018C 1182 nt6.81□□□□□ -1.32
SHE3P38272 MCH2YKL221W 1422 nt6.81□□□□□ -1.32
SHE3P38272 YNL040WYNL040W 1371 nt6.81□□□□□ -1.32
SHE3P38272 ATO2YNR002C 849 nt6.8□□□□□ -1.32
SHE3P38272 PPH22YDL188C 1134 nt6.79□□□□□ -1.32
SHE3P38272 MSP1YGR028W 1089 nt6.79□□□□□ -1.32
SHE3P38272 YOR012WYOR012W 414 nt6.79□□□□□ -1.32
SHE3P38272 YMR279CYMR279C 1623 nt6.79□□□□□ -1.32
SHE3P38272 YMR295CYMR295C 594 nt6.78□□□□□ -1.32
SHE3P38272 MRPL10YNL284C 969 nt6.78□□□□□ -1.32
SHE3P38272 ARC35YNR035C 1029 nt6.78□□□□□ -1.32
SHE3P38272 IRC11YOR013W 471 nt6.78□□□□□ -1.32
SHE3P38272 YPL257WYPL257W 582 nt6.78□□□□□ -1.32
SHE3P38272 YJR146WYJR146W 354 nt6.77□□□□□ -1.33
SHE3P38272 QRI5YLR204W 336 nt6.77□□□□□ -1.33
SHE3P38272 MSO1YNR049C 633 nt6.77□□□□□ -1.33
SHE3P38272 OPI11YPR044C 354 nt6.77□□□□□ -1.33
SHE3P38272 HBN1YCL026C-B 582 nt6.77□□□□□ -1.33
SHE3P38272 CDC13YDL220C 2775 nt6.77□□□□□ -1.33
SHE3P38272 POB3YML069W 1659 nt6.77□□□□□ -1.33
SHE3P38272 NUP84YDL116W 2181 nt6.76□□□□□ -1.33
SHE3P38272 PRY3YJL078C 2646 nt6.76□□□□□ -1.33
SHE3P38272 YLR157W-EYLR157W-E 165 nt6.76□□□□□ -1.33
SHE3P38272 YMR253CYMR253C 1245 nt6.76□□□□□ -1.33
SHE3P38272 KSH1YNL024C-A 219 nt6.76□□□□□ -1.33
SHE3P38272 STT3YGL022W 2157 nt6.75□□□□□ -1.33
SHE3P38272 HEL1YKR017C 1656 nt6.75□□□□□ -1.33
SHE3P38272 ERS1YCR075C 783 nt6.75□□□□□ -1.33
SHE3P38272 tG(GCC)BtG(GCC)B 71 nt6.74□□□□□ -1.33
SHE3P38272 SUF16tG(GCC)C 71 nt6.74□□□□□ -1.33
SHE3P38272 tG(GCC)D1tG(GCC)D1 71 nt6.74□□□□□ -1.33
SHE3P38272 tG(GCC)D2tG(GCC)D2 71 nt6.74□□□□□ -1.33
SHE3P38272 tG(GCC)EtG(GCC)E 71 nt6.74□□□□□ -1.33
SHE3P38272 SUF20tG(GCC)F1 71 nt6.74□□□□□ -1.33
SHE3P38272 tG(GCC)F2tG(GCC)F2 71 nt6.74□□□□□ -1.33
SHE3P38272 tG(GCC)G1tG(GCC)G1 71 nt6.74□□□□□ -1.33
SHE3P38272 tG(GCC)G2tG(GCC)G2 71 nt6.74□□□□□ -1.33
SHE3P38272 tG(GCC)J1tG(GCC)J1 71 nt6.74□□□□□ -1.33
SHE3P38272 SUF23tG(GCC)J2 71 nt6.74□□□□□ -1.33
SHE3P38272 tG(GCC)MtG(GCC)M 71 nt6.74□□□□□ -1.33
SHE3P38272 tG(GCC)O1tG(GCC)O1 71 nt6.74□□□□□ -1.33
SHE3P38272 SUF17tG(GCC)O2 71 nt6.74□□□□□ -1.33
SHE3P38272 tG(GCC)P1tG(GCC)P1 71 nt6.74□□□□□ -1.33
SHE3P38272 tG(GCC)P2tG(GCC)P2 71 nt6.74□□□□□ -1.33
SHE3P38272 MPC2YHR162W 390 nt6.74□□□□□ -1.33
SHE3P38272 MIA40YKL195W 1212 nt6.74□□□□□ -1.33
SHE3P38272 AVO2YMR068W 1281 nt6.74□□□□□ -1.33
SHE3P38272 SGF29YCL010C 780 nt6.74□□□□□ -1.33
SHE3P38272 GCN3YKR026C 918 nt6.73□□□□□ -1.33
SHE3P38272 DFR1YOR236W 636 nt6.73□□□□□ -1.33
SHE3P38272 YPL250W-AYPL250W-A 288 nt6.73□□□□□ -1.33
SHE3P38272 PTC3YBL056W 1407 nt6.73□□□□□ -1.33
SHE3P38272 TAH11YJR046W 1815 nt6.73□□□□□ -1.33
SHE3P38272 EDE1YBL047C 4146 nt6.72□□□□□ -1.33
SHE3P38272 RGD2YFL047W 2145 nt6.72□□□□□ -1.33
SHE3P38272 PAC10YGR078C 600 nt6.72□□□□□ -1.33
SHE3P38272 OGG1YML060W 1131 nt6.72□□□□□ -1.33
SHE3P38272 RFS1YBR052C 633 nt6.72□□□□□ -1.33
SHE3P38272 BNA3YJL060W 1335 nt6.72□□□□□ -1.33
SHE3P38272 YBR241CYBR241C 1467 nt6.72□□□□□ -1.33
SHE3P38272 SMC5YOL034W 3282 nt6.72□□□□□ -1.33
SHE3P38272 YNL097W-AYNL097W-A 156 nt6.71□□□□□ -1.34
SHE3P38272 ARE2YNR019W 1929 nt6.71□□□□□ -1.34
SHE3P38272 YCR061WYCR061W 1896 nt6.7□□□□□ -1.34
SHE3P38272 SRL2YLR082C 1179 nt6.7□□□□□ -1.34
SHE3P38272 COQ3YOL096C 939 nt6.7□□□□□ -1.34
SHE3P38272 YPR196WYPR196W 1413 nt6.69□□□□□ -1.34
SHE3P38272 ERG1YGR175C 1491 nt6.69□□□□□ -1.34
SHE3P38272 TIM22YDL217C 624 nt6.69□□□□□ -1.34
SHE3P38272 YJR084WYJR084W 1272 nt6.69□□□□□ -1.34
SHE3P38272 AAT2YLR027C 1257 nt6.69□□□□□ -1.34
SHE3P38272 AQR1YNL065W 1761 nt6.69□□□□□ -1.34
SHE3P38272 ECM27YJR106W 2178 nt6.68□□□□□ -1.34
SHE3P38272 DSF1YEL070W 1509 nt6.68□□□□□ -1.34
SHE3P38272 YNR073CYNR073C 1509 nt6.68□□□□□ -1.34
SHE3P38272 HVG1YER039C 750 nt6.68□□□□□ -1.34
SHE3P38272 MDE1YJR024C 735 nt6.68□□□□□ -1.34
SHE3P38272 DID2YKR035W-A 615 nt6.68□□□□□ -1.34
SHE3P38272 GTO3YMR251W 1101 nt6.68□□□□□ -1.34
SHE3P38272 YGR054WYGR054W 1929 nt6.68□□□□□ -1.34
SHE3P38272 CYB2YML054C 1776 nt6.67□□□□□ -1.34
SHE3P38272 YDL085C-AYDL085C-A 207 nt6.67□□□□□ -1.34
SHE3P38272 VPS24YKL041W 675 nt6.67□□□□□ -1.34
SHE3P38272 FPR3YML074C 1236 nt6.67□□□□□ -1.34
SHE3P38272 TSR3YOR006C 942 nt6.67□□□□□ -1.34
Retrieved 100 of 7,029 protein–RNA pairs in 24 ms