Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 TRS31YDR472W 852 nt10.12□□□□□ -0.79
TY2B-LR1P0C2J3 LYS1YIR034C 1122 nt10.12□□□□□ -0.79
TY2B-LR1P0C2J3 YHR020WYHR020W 2067 nt10.1□□□□□ -0.79
TY2B-LR1P0C2J3 MAK31YCR020C-A 267 nt10.09□□□□□ -0.79
TY2B-LR1P0C2J3 RPE1YJL121C 717 nt10.09□□□□□ -0.79
TY2B-LR1P0C2J3 YPL257WYPL257W 582 nt10.09□□□□□ -0.79
TY2B-LR1P0C2J3 YET3YDL072C 612 nt10.08□□□□□ -0.8
TY2B-LR1P0C2J3 YDL177CYDL177C 513 nt10.08□□□□□ -0.8
TY2B-LR1P0C2J3 MTC2YKL098W 1074 nt10.08□□□□□ -0.8
TY2B-LR1P0C2J3 HSV2YGR223C 1347 nt10.08□□□□□ -0.8
TY2B-LR1P0C2J3 CDC19YAL038W 1503 nt10.08□□□□□ -0.8
TY2B-LR1P0C2J3 STT3YGL022W 2157 nt10.08□□□□□ -0.8
TY2B-LR1P0C2J3 FAL1YDR021W 1200 nt10.07□□□□□ -0.8
TY2B-LR1P0C2J3 MDE1YJR024C 735 nt10.06□□□□□ -0.8
TY2B-LR1P0C2J3 YBR241CYBR241C 1467 nt10.05□□□□□ -0.8
TY2B-LR1P0C2J3 CEM1YER061C 1329 nt10.05□□□□□ -0.8
TY2B-LR1P0C2J3 TMA46YOR091W 1038 nt10.04□□□□□ -0.8
TY2B-LR1P0C2J3 CTF19YPL018W 1110 nt10.04□□□□□ -0.8
TY2B-LR1P0C2J3 ATG36YJL185C 882 nt10.03□□□□□ -0.8
TY2B-LR1P0C2J3 TUF1YOR187W 1314 nt10.03□□□□□ -0.8
TY2B-LR1P0C2J3 AMD2YDR242W 1650 nt10.03□□□□□ -0.8
TY2B-LR1P0C2J3 tG(GCC)BtG(GCC)B 71 nt10.02□□□□□ -0.81
TY2B-LR1P0C2J3 SUF16tG(GCC)C 71 nt10.02□□□□□ -0.81
TY2B-LR1P0C2J3 tG(GCC)D1tG(GCC)D1 71 nt10.02□□□□□ -0.81
TY2B-LR1P0C2J3 tG(GCC)D2tG(GCC)D2 71 nt10.02□□□□□ -0.81
TY2B-LR1P0C2J3 tG(GCC)EtG(GCC)E 71 nt10.02□□□□□ -0.81
TY2B-LR1P0C2J3 SUF20tG(GCC)F1 71 nt10.02□□□□□ -0.81
TY2B-LR1P0C2J3 tG(GCC)F2tG(GCC)F2 71 nt10.02□□□□□ -0.81
TY2B-LR1P0C2J3 tG(GCC)G1tG(GCC)G1 71 nt10.02□□□□□ -0.81
TY2B-LR1P0C2J3 tG(GCC)G2tG(GCC)G2 71 nt10.02□□□□□ -0.81
TY2B-LR1P0C2J3 tG(GCC)J1tG(GCC)J1 71 nt10.02□□□□□ -0.81
TY2B-LR1P0C2J3 SUF23tG(GCC)J2 71 nt10.02□□□□□ -0.81
TY2B-LR1P0C2J3 tG(GCC)MtG(GCC)M 71 nt10.02□□□□□ -0.81
TY2B-LR1P0C2J3 tG(GCC)O1tG(GCC)O1 71 nt10.02□□□□□ -0.81
TY2B-LR1P0C2J3 SUF17tG(GCC)O2 71 nt10.02□□□□□ -0.81
TY2B-LR1P0C2J3 tG(GCC)P1tG(GCC)P1 71 nt10.02□□□□□ -0.81
TY2B-LR1P0C2J3 tG(GCC)P2tG(GCC)P2 71 nt10.02□□□□□ -0.81
TY2B-LR1P0C2J3 ADY2YCR010C 852 nt10.01□□□□□ -0.81
TY2B-LR1P0C2J3 RPS5YJR123W 678 nt10.01□□□□□ -0.81
TY2B-LR1P0C2J3 YJR154WYJR154W 1041 nt10.01□□□□□ -0.81
TY2B-LR1P0C2J3 SSP120YLR250W 705 nt10.01□□□□□ -0.81
TY2B-LR1P0C2J3 MIX17YMR002W 471 nt10.01□□□□□ -0.81
TY2B-LR1P0C2J3 SKS1YPL026C 1509 nt10.01□□□□□ -0.81
TY2B-LR1P0C2J3 TDP1YBR223C 1635 nt10□□□□□ -0.81
TY2B-LR1P0C2J3 HST3YOR025W 1344 nt9.99□□□□□ -0.81
TY2B-LR1P0C2J3 RPP1YHR062C 882 nt9.99□□□□□ -0.81
TY2B-LR1P0C2J3 ISN1YOR155C 1353 nt9.99□□□□□ -0.81
TY2B-LR1P0C2J3 SKG1YKR100C 1068 nt9.98□□□□□ -0.81
TY2B-LR1P0C2J3 CCC2YDR270W 3015 nt9.98□□□□□ -0.81
TY2B-LR1P0C2J3 YJR146WYJR146W 354 nt9.98□□□□□ -0.81
TY2B-LR1P0C2J3 GTO3YMR251W 1101 nt9.98□□□□□ -0.81
TY2B-LR1P0C2J3 RFS1YBR052C 633 nt9.98□□□□□ -0.81
TY2B-LR1P0C2J3 RHB1YCR027C 630 nt9.97□□□□□ -0.81
TY2B-LR1P0C2J3 MRPL28YDR462W 444 nt9.97□□□□□ -0.81
TY2B-LR1P0C2J3 KTR3YBR205W 1215 nt9.96□□□□□ -0.82
TY2B-LR1P0C2J3 PRS2YER099C 957 nt9.95□□□□□ -0.82
TY2B-LR1P0C2J3 YJR084WYJR084W 1272 nt9.95□□□□□ -0.82
TY2B-LR1P0C2J3 RUF23RUF23 254 nt9.95□□□□□ -0.82
TY2B-LR1P0C2J3 GAT4YIR013C 366 nt9.94□□□□□ -0.82
TY2B-LR1P0C2J3 PAC2YER007W 1557 nt9.94□□□□□ -0.82
TY2B-LR1P0C2J3 snR82snR82 268 nt9.93□□□□□ -0.82
TY2B-LR1P0C2J3 CRF1YDR223W 1404 nt9.93□□□□□ -0.82
TY2B-LR1P0C2J3 HRQ1YDR291W 3234 nt9.93□□□□□ -0.82
TY2B-LR1P0C2J3 PPT1YGR123C 1542 nt9.93□□□□□ -0.82
TY2B-LR1P0C2J3 JNM1YMR294W 1122 nt9.93□□□□□ -0.82
TY2B-LR1P0C2J3 CAF40YNL288W 1122 nt9.93□□□□□ -0.82
TY2B-LR1P0C2J3 YNL042W-BYNL042W-B 258 nt9.92□□□□□ -0.82
TY2B-LR1P0C2J3 MAL31YBR298C 1845 nt9.91□□□□□ -0.82
TY2B-LR1P0C2J3 COX10YPL172C 1389 nt9.91□□□□□ -0.82
TY2B-LR1P0C2J3 FLC2YAL053W 2352 nt9.91□□□□□ -0.82
TY2B-LR1P0C2J3 RFC4YOL094C 972 nt9.91□□□□□ -0.82
TY2B-LR1P0C2J3 ICL1YER065C 1674 nt9.9□□□□□ -0.82
TY2B-LR1P0C2J3 BUG1YDL099W 1026 nt9.89□□□□□ -0.83
TY2B-LR1P0C2J3 SPT3YDR392W 1014 nt9.89□□□□□ -0.83
TY2B-LR1P0C2J3 YFL013W-AYFL013W-A 804 nt9.89□□□□□ -0.83
TY2B-LR1P0C2J3 AIM33YML087C 939 nt9.88□□□□□ -0.83
TY2B-LR1P0C2J3 RMD8YFR048W 1989 nt9.88□□□□□ -0.83
TY2B-LR1P0C2J3 YOR342CYOR342C 960 nt9.88□□□□□ -0.83
TY2B-LR1P0C2J3 MRP17YKL003C 396 nt9.87□□□□□ -0.83
TY2B-LR1P0C2J3 DFR1YOR236W 636 nt9.87□□□□□ -0.83
TY2B-LR1P0C2J3 YPR160C-AYPR160C-A 285 nt9.87□□□□□ -0.83
TY2B-LR1P0C2J3 EDE1YBL047C 4146 nt9.86□□□□□ -0.83
TY2B-LR1P0C2J3 YDL022C-AYDL022C-A 249 nt9.86□□□□□ -0.83
TY2B-LR1P0C2J3 ARG1YOL058W 1263 nt9.86□□□□□ -0.83
TY2B-LR1P0C2J3 ILV1YER086W 1731 nt9.86□□□□□ -0.83
TY2B-LR1P0C2J3 YKR018CYKR018C 2178 nt9.86□□□□□ -0.83
TY2B-LR1P0C2J3 SNT309YPR101W 528 nt9.86□□□□□ -0.83
TY2B-LR1P0C2J3 ENB1YOL158C 1821 nt9.85□□□□□ -0.83
TY2B-LR1P0C2J3 LDB18YLL049W 540 nt9.85□□□□□ -0.83
TY2B-LR1P0C2J3 YML012C-AYML012C-A 378 nt9.83□□□□□ -0.84
TY2B-LR1P0C2J3 LDB16YCL005W 771 nt9.83□□□□□ -0.84
TY2B-LR1P0C2J3 ADE12YNL220W 1302 nt9.83□□□□□ -0.84
TY2B-LR1P0C2J3 RPS3YNL178W 723 nt9.82□□□□□ -0.84
TY2B-LR1P0C2J3 AQR1YNL065W 1761 nt9.82□□□□□ -0.84
TY2B-LR1P0C2J3 YDL119CYDL119C 924 nt9.8□□□□□ -0.84
TY2B-LR1P0C2J3 COX20YDR231C 618 nt9.8□□□□□ -0.84
TY2B-LR1P0C2J3 CAN1YEL063C 1773 nt9.8□□□□□ -0.84
TY2B-LR1P0C2J3 RPR2YIR015W 435 nt9.8□□□□□ -0.84
TY2B-LR1P0C2J3 OPI11YPR044C 354 nt9.8□□□□□ -0.84
TY2B-LR1P0C2J3 SPO7YAL009W 780 nt9.78□□□□□ -0.84
Retrieved 100 of 7,029 protein–RNA pairs in 17.3 ms